Protein
View in Explore- Genbank accession
- ANZ51622.1 [GenBank]
- Protein name
- tail connector protein
- RBP type
-
TSP
- Protein sequence
-
MEKFMAEFGQGYVQTPFLSESNSVRYKISIAGSCPLSTAGPYVKFQDNPVGSQTFSAGLHLRVFDPSTGALVDSKSYAFSTSNDTTSAAFVSFMNSLANNRLVAILTNGKVNFPPEVASWLRTAGTSAFPSDSILSRFDVSYAAFYTSSKRAIALEHVKLSNRKSTDDYQTILDVVFDSLEDVGATGFPRRTYESVEQFMSAVGGTNNEIARLPTSAAISKLSDYNLIPGDVLYLKAQLYADADLLALGTTNISIRFYNASNGYISSTQAEFTGQAGSWELKEDYVVVPENAVGFTIYAQRTAQAGQGGMRNLSFSEVSRNGGISKPAEFGVNGIRVNYICESASPPDIMVLPTQASSKTGKVFGQEFREV
- Physico‐chemical
properties -
protein length: 371 AA molecular weight: 40101,33090 Da isoelectric point: 5,27076 aromaticity: 0,11051 hydropathy: -0,13181
Domains
Domains [InterPro]
DC_0912
STR
1–371
STR
1–371
PS52031
LEC
22–192
LEC
22–192
IPR039477
STR
58–127
STR
58–127
1
371
Architecture
STR 1-371
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
371
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 156 | 156 | 0,4707 |
| Central domain | 157 | 360 | 205 | 0,4174 |
| C-terminal | 361 | 371 | 10 | 0,1477 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-156
1-156
Central
157-360
157-360
C-terminal
361-371
361-371
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Enterobacteria phage Kha5h [NCBI] |
1651198 | Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
ANZ51622.1
[NCBI]
Genbank nucleotide accession
KT184312
[NCBI]
CDS location
range 9494 -> 10609
strand +
strand +
CDS
ATGGAAAAATTTATGGCAGAGTTTGGACAAGGATATGTCCAAACGCCATTTTTATCGGAAAGTAATTCAGTAAGATACAAAATAAGTATAGCGGGTTCTTGCCCGCTTTCTACTGCAGGACCATACGTTAAATTTCAGGATAATCCTGTAGGAAGTCAAACATTTAGCGCAGGTCTTCATTTAAGAGTTTTTGACCCTTCCACCGGAGCATTAGTTGATAGTAAGTCATATGCTTTTTCGACTTCAAATGATACTACATCAGCTGCTTTTGTTAGTTTCATGAATTCTTTGGCGAATAATAGACTTGTTGCTATATTAACTAACGGAAAAGTTAATTTTCCTCCTGAAGTAGCATCTTGGTTAAGAACCGCCGGAACGTCTGCTTTTCCATCTGATTCTATATTGTCAAGATTTGACGTATCATATGCTGCTTTTTATACTTCTTCTAAAAGAGCTATCGCATTAGAGCATGTTAAACTGAGTAATAGAAAAAGCACAGATGACTATCAAACTATTTTAGATGTTGTATTTGACAGTTTAGAAGACGTCGGAGCTACCGGGTTTCCAAGAAGAACGTATGAAAGCGTTGAGCAATTCATGTCAGCGGTTGGTGGAACTAATAACGAAATTGCAAGATTACCAACTTCAGCTGCTATAAGTAAATTATCTGATTATAATTTAATTCCCGGAGATGTTCTTTATCTTAAAGCTCAGTTATATGCTGATGCCGATTTACTTGCTCTTGGAACTACAAATATATCTATCCGTTTTTATAATGCATCAAATGGATATATTTCTTCAACACAAGCTGAATTTACTGGGCAAGCTGGGTCATGGGAATTAAAGGAAGATTATGTAGTTGTTCCAGAAAACGCAGTAGGATTTACGATATATGCACAAAGAACTGCACAAGCTGGTCAAGGCGGCATGAGAAATTTAAGTTTTTCTGAAGTATCAAGAAACGGCGGTATTTCAAAACCTGCTGAATTTGGCGTCAATGGTATTCGTGTTAATTATATCTGTGAATCTGCTTCACCTCCGGATATAATGGTACTTCCTACACAAGCATCGTCTAAAACTGGTAAAGTGTTTGGACAAGAATTTAGAGAAGTATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
065e326709fd0e24d1d76aeafc535ba464f2e508269321753b5dda527ea1de36
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Identification and characterization of nine bacteriophages able to infect non-O157 STEC | Farrokhzad,K., Applegate,B.M. and Zhang,J. | 2017-12 | — | GenBank |