Phage RBP Database

Genbank accession

WVH05599.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,82

TSP

Evidence RBPdetect2

Probability 0,93

Seq2Symm

C3 confidence 1,000

C3	1,000
C1	0,065
D3	0,003

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MPSPLENAINSINNAADRADVTTEFFDSVTTGSQTETVTNPNNNKSVPTVQKQIKDLFTESETEINNAVASASQSAQSASDDAYQVALDKLSVEQSETNAAQSAANAEQSYQDTLAVVPNLQSQIDQRVTYPELTDAQEELLPPGSQIYPDDGSYLENGMNVTAGTTHIRVLIGGEPTILVAWDTLTLPATVTSIPVSDNGFAGYDVVTDQGTFEFVTTDIFNYRKNNNPLGYGYDGTDQTTANFQKYLDENPGSVVGNFILGGGIDTDLIIQPNTNINSMSINGIELSSKFKAGKRLRLPPNFPFQYQIPCIADSYGRVRLLGWDTSIFDFTSNGDATPFTTLYVDNLNGNNANDGLDPLLPLRSVNAAFDEITNNLYTRALILIAGGYYYDLDSWGSREPNTDIVVKQWFIDGDLRNNTKPTLAAETPNLSWSLNSGNVYQATRSGVKYVVDENSTNEYGDWFDYSVVSSIAECEATEGSFYTDNITVYVHRVGGGAPDSTIHCMLSKSNAGCSDGTYTLYVEGINLYGGTTGFKADSRPDGTSETVVLKDVKQLYSSSNGIENYGIDFMITQDCVVGYSLSDNYNYHSNRDTLTQVCRSIEINNIGYRAGRLDSPSLDSNNGSTSHESNQVIRLGCSYEDAQGPVVADVQDAKSYNFCISASRSVRIGETARKSSYLISGGDMWLDNCIGFDSLYSLDAYSGGNMYVEDICIDSSIEGIENISPIIR

Physico‐chemical properties

protein length:	730 AA
molecular weight:	79472,05210 Da
isoelectric point:	4,19917
aromaticity:	0,09315
hydropathy:	-0,37178

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WVH05599.1

1 730 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	241	241	0,9932
Central domain	242	719	479	0,9160
C-terminal	720	730	10	0,1995

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Vibrio phage vB_VpaS_PGB [NCBI] · taxon 3111808

No lineage information

Host No host information

Genbank protein accession

WVH05599.1 [NCBI]

Genbank nucleotide accession

PP001176 [NCBI]

CDS location

range 34803 -> 36995
strand -

CDS

ATGCCTAGTCCATTAGAAAACGCCATTAACAGCATAAACAATGCTGCTGACAGGGCTGATGTAACCACAGAGTTTTTTGATTCAGTAACAACTGGAAGTCAAACTGAAACGGTAACGAACCCAAACAACAATAAGTCAGTCCCAACCGTTCAGAAGCAAATAAAAGATCTGTTCACCGAGTCTGAAACGGAAATTAATAACGCGGTTGCATCAGCATCGCAAAGTGCGCAGAGCGCATCCGATGATGCCTACCAGGTAGCTCTTGATAAATTATCGGTTGAACAATCAGAAACGAACGCGGCACAAAGCGCAGCAAATGCCGAGCAATCCTACCAAGACACGCTAGCGGTAGTTCCTAACCTTCAGTCACAAATAGACCAGAGAGTTACATACCCGGAGCTAACTGATGCACAAGAAGAACTACTTCCTCCTGGCTCACAGATTTACCCAGACGACGGCAGTTACCTAGAAAACGGAATGAACGTAACAGCAGGAACTACTCACATTCGCGTTTTGATCGGTGGTGAGCCTACTATCTTAGTTGCGTGGGACACCTTGACATTACCTGCAACAGTTACATCTATTCCTGTTTCAGATAACGGATTCGCTGGTTATGACGTGGTGACAGATCAAGGTACGTTTGAGTTTGTAACTACTGATATTTTTAATTACCGTAAAAACAACAATCCATTAGGTTACGGTTACGATGGAACAGATCAGACTACCGCCAATTTCCAAAAGTATCTTGATGAAAATCCGGGCTCTGTAGTTGGTAATTTTATTTTGGGGGGTGGAATTGATACTGATTTAATCATTCAACCAAACACAAACATAAATAGTATGTCTATTAATGGCATAGAACTATCATCTAAATTTAAAGCAGGAAAGAGATTAAGACTTCCTCCTAACTTTCCTTTTCAGTACCAGATCCCATGCATAGCAGATTCTTACGGAAGGGTAAGATTGCTAGGGTGGGATACAAGTATTTTTGACTTTACATCTAACGGAGATGCAACACCGTTTACAACACTATATGTAGATAATTTAAACGGAAATAATGCCAATGACGGTTTAGATCCTTTACTTCCACTACGCTCTGTAAATGCTGCATTTGATGAGATAACTAACAATTTATACACTAGAGCGTTAATACTTATAGCAGGTGGGTATTATTATGATCTTGATAGTTGGGGCAGTAGAGAGCCAAATACTGATATTGTTGTTAAGCAATGGTTTATTGATGGAGATTTGAGAAATAATACCAAGCCAACACTTGCAGCAGAGACTCCAAATTTATCTTGGTCATTAAATAGCGGAAATGTATATCAAGCAACTAGGTCTGGCGTTAAATATGTTGTAGATGAAAATAGTACGAATGAATATGGGGATTGGTTTGACTACTCAGTTGTATCATCTATAGCGGAATGCGAAGCAACTGAAGGGTCTTTTTATACTGACAATATCACAGTTTATGTACACAGGGTTGGTGGTGGCGCTCCTGATTCTACAATCCATTGCATGCTATCTAAATCCAATGCAGGATGTTCTGATGGGACCTACACGCTTTACGTTGAAGGCATAAACTTATATGGCGGTACAACAGGGTTCAAAGCAGACTCTAGACCGGATGGCACAAGTGAAACTGTAGTACTTAAAGACGTTAAGCAGTTGTATTCCTCATCGAATGGTATTGAGAATTACGGCATAGACTTCATGATAACTCAAGACTGTGTTGTTGGTTACTCCTTATCTGATAACTATAACTACCATTCAAACAGAGATACGTTAACTCAAGTTTGCAGATCGATAGAGATCAATAATATAGGCTATCGTGCAGGTAGATTAGACAGTCCTAGTCTAGATTCAAATAATGGATCGACTTCTCACGAGTCAAATCAAGTAATAAGACTTGGTTGTAGTTATGAAGACGCTCAAGGCCCAGTTGTTGCTGATGTTCAAGATGCAAAATCATATAATTTCTGTATATCTGCATCTCGAAGTGTGAGGATAGGGGAAACAGCCAGGAAGTCATCATATTTAATTAGTGGCGGTGATATGTGGCTTGATAACTGTATCGGTTTTGATTCTCTATATTCCTTAGATGCTTATTCTGGTGGTAACATGTACGTTGAAGATATCTGCATTGATTCCAGCATTGAAGGTATTGAAAACATATCACCAATAATTAGGTAA

Protein

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)