Protein

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Genbank accession
XAN63925.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRTIFTKDDLGNIIDLGFAKGGQVDGNVTIDGTLRVNGPINNFGNFSTSGTITASNIVSATVFRSTSGSFYTRAINDTANAHLWFENTNGSERGVLYSKPQSENEGVITMRVRQGTAAGAQNSEFHFISTDGGIFQAHKLTALTSISTPTISVNLINHDSKAFGQYDSQSLVNYVYPGTGETNGVNYLRKVRAKSGGTIWHEICTAQTGQADEVSWWTGSTPVSKQCGIRNDGRMIVRNSLALGTMTTDFPSSDYGNGGALGFGAYLALGDNGTGLRYQKTGVYDLVGSGSSVASVTPDSFRSTLKGIFGRSEDQGTTWIMPGTNAAFLSVQTQADENTAGDGQTHIGYNSGGKMNHYFRGKGKTNINTQEGMEVNPGILKLVTGANNVMFYADGGITSVKQLSIYNGIYLAANNSTAGLTFAPTTTVDGTKQILWEGGKRAGQNKNPVTVKVWGDSFDASGDRNRETVFEVADEQGYYFYAQRTNPASGQTVGPVNFKFNGTVETGHIIGLGNISASGTVSSSRFEALGDIAFKNANNRHIRFEYVNSGGATAVDGYIFKDGPSATNRRPGIRINCAAPNSSTSSGDFVFNEDGNLTVPVQVQPGNFGNFDSRYPKLFQLGANVNLDTLTGDNQLGEWAQHANANTSLALNYPEAQAGHLTVTAGAGVQQTYRVYNSSRVYLRSKYSTSAWTPWDRVVTEYYLKSGIPSQFVSKNSDGFRIAYGDYGFFIRNDGSNTYFMLTNSGDQMGPWNGLRPLAINNSNGNVTMSHSLTVGGSSSFSSALTVGNGLTVNGASGINVTSTAGDAISWGDAGARLANDGNLKGTRWASFGGALWLGDALDWVHGQNVSKSGDTMTGTLTLNNGQLVLNGGSGNIGFTKAGANPRSMRIFHAGDGTRGNRIEIADETNYIAYFQKLPGGQNQVSFNSATLSGLTQCNQFGVNTTNALGGNSITFGDNDTGIKQNGDGLLDIYANGVQTFRFQNGDLYSYKNINAPNVYIRSDIRLKSNFKPIENALDKVEKLNGIIYDKAEYIGGEAIETEAGIVAQTLQDVLPEAVRETEDSKGNKILTVSSQAQIALLVEAVKTLSSRVKELESKLM
Physico‐chemical
properties
protein length:1135 AA
molecular weight: 121130,48390 Da
isoelectric point:6,57169
aromaticity:0,09163
hydropathy:-0,35392

Domains

Domains [InterPro]
DC_1954
STR
1–1134
DC_1954
cd19958
STR
654–732
cd19958 IPR048390 IPR030392
IPR030392
CHP
1037–1094
IPR030392 Coil
XAN63925.1
1 1135
Architecture
STR
ATT
STR
STR 1-743 | ATT 744-794 | STR 795-1134 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAN63925.1
1 1135
Domain Start End Length (AA) Confidence
N-terminal 1 48 48 0,7861
Central domain 49 247 200 0,1961
C-terminal 248 1135 887 0,7509
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-48
Central
49-247
C-terminal
248-1135

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage F13076
[NCBI] 		3143138 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAN63925.1 [NCBI]
Genbank nucleotide accession
PP738980 [NCBI]
CDS location
range 120716 -> 124123
strand -
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACCGCAGGTGCACGTCCTGCTGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGATAGAACAATTTTTACTAAAGATGATTTAGGAAATATCATTGATCTGGGTTTTGCTAAAGGCGGGCAAGTTGATGGAAATGTAACTATTGATGGAACTTTACGCGTCAATGGACCAATAAACAACTTTGGAAATTTTTCTACAAGTGGCACTATCACGGCAAGTAATATTGTTTCTGCTACAGTATTCAGATCAACATCCGGTTCATTTTATACAAGAGCAATAAATGATACAGCAAATGCCCATCTTTGGTTTGAAAATACGAATGGGTCGGAAAGAGGGGTTTTATACTCAAAACCACAGTCTGAAAATGAAGGCGTAATTACAATGCGTGTTCGCCAAGGAACCGCAGCGGGGGCTCAAAATTCAGAATTTCATTTCATTTCTACTGATGGTGGTATCTTCCAGGCACACAAATTAACTGCTTTAACTTCTATTAGTACACCAACTATTAGTGTTAATTTAATTAATCATGATTCTAAAGCCTTTGGACAATATGATTCTCAATCTTTAGTCAACTATGTTTATCCTGGAACCGGTGAAACTAACGGAGTAAACTATCTTCGTAAAGTGCGTGCTAAATCTGGCGGCACTATATGGCATGAAATCTGTACGGCCCAAACAGGTCAGGCTGATGAGGTTTCTTGGTGGACTGGTAGTACTCCAGTATCTAAACAATGCGGTATTCGTAATGACGGGCGAATGATTGTTCGTAATAGTCTTGCACTTGGCACAATGACTACTGATTTTCCGTCAAGTGATTATGGTAATGGAGGTGCTTTAGGATTTGGCGCTTATTTAGCTCTAGGTGATAACGGCACAGGTTTACGTTATCAAAAAACCGGTGTTTATGATTTAGTCGGTTCTGGATCATCTGTTGCATCTGTTACTCCAGATAGTTTCCGTAGTACTCTTAAAGGTATATTTGGTCGTTCAGAAGACCAAGGCACCACATGGATTATGCCTGGCACTAATGCCGCTTTCTTGTCTGTTCAAACACAAGCTGATGAAAACACTGCTGGAGACGGCCAGACACATATTGGCTATAACTCAGGCGGTAAAATGAACCACTATTTCCGTGGTAAAGGCAAAACTAATATTAATACTCAAGAAGGCATGGAAGTTAACCCGGGTATTCTTAAACTAGTAACCGGTGCAAATAATGTAATGTTTTATGCTGATGGCGGTATTACATCTGTTAAGCAGCTTTCAATATATAACGGCATATATTTAGCAGCTAATAATTCTACTGCTGGGCTAACATTCGCTCCAACTACTACAGTTGATGGCACTAAGCAAATTTTGTGGGAAGGTGGTAAGCGCGCTGGTCAAAACAAAAACCCTGTTACAGTTAAAGTGTGGGGTGATTCATTTGACGCATCCGGTGATCGTAATCGTGAAACCGTTTTTGAAGTAGCTGATGAGCAAGGTTATTATTTCTACGCTCAACGTACTAATCCTGCATCAGGTCAAACAGTAGGTCCGGTTAACTTTAAATTTAACGGAACTGTCGAAACAGGCCATATCATAGGCCTTGGTAATATAAGTGCCTCCGGCACAGTATCATCTTCAAGATTTGAGGCTCTTGGCGATATAGCATTTAAAAATGCTAACAACCGCCATATTCGTTTCGAATATGTTAATAGTGGCGGAGCAACTGCTGTAGATGGTTATATCTTCAAAGATGGCCCTTCGGCTACAAACCGTCGTCCTGGTATTCGTATTAACTGTGCTGCTCCTAATTCTTCTACTAGTTCTGGTGATTTCGTCTTTAATGAAGACGGGAACCTTACGGTTCCCGTTCAAGTACAACCAGGTAATTTCGGCAACTTTGATTCACGTTATCCGAAGTTGTTCCAATTAGGCGCAAATGTAAACCTTGATACTTTAACAGGTGATAATCAGCTTGGCGAATGGGCCCAGCATGCAAATGCAAATACATCGTTAGCTTTGAATTATCCTGAAGCTCAAGCGGGCCATTTAACAGTTACCGCTGGTGCAGGTGTTCAACAAACTTATCGCGTTTATAATTCAAGTCGTGTATACTTACGTTCAAAATATAGCACGAGTGCTTGGACTCCTTGGGACCGGGTTGTAACAGAATATTATTTGAAATCTGGAATTCCTTCTCAATTCGTATCTAAAAACTCTGATGGATTCCGTATTGCATATGGTGACTACGGGTTCTTTATCCGTAATGATGGCAGCAATACTTATTTCATGTTGACCAACTCTGGTGACCAAATGGGCCCATGGAACGGCCTTCGTCCGCTGGCTATTAATAACTCTAATGGCAACGTAACAATGAGTCATTCATTGACCGTTGGTGGTTCTTCATCATTTAGTAGTGCTTTAACAGTAGGTAATGGATTGACTGTTAACGGCGCCTCAGGTATTAACGTTACTAGTACTGCTGGTGATGCTATTTCTTGGGGTGACGCCGGCGCTCGTTTAGCAAATGACGGTAACTTAAAAGGAACACGTTGGGCTTCATTTGGCGGGGCGTTATGGCTTGGTGATGCTTTAGATTGGGTTCACGGTCAAAACGTTTCTAAGTCTGGCGACACTATGACAGGTACATTAACCTTAAATAACGGTCAACTTGTACTTAATGGTGGCTCAGGTAATATTGGTTTTACTAAAGCAGGTGCCAACCCGCGCAGTATGCGTATATTCCATGCTGGCGATGGAACTCGTGGTAACCGTATTGAAATTGCCGATGAAACTAACTATATTGCTTATTTTCAAAAATTACCTGGTGGTCAAAACCAAGTTTCATTCAATAGCGCTACACTTTCTGGATTAACACAGTGTAATCAGTTTGGCGTTAATACAACAAACGCACTTGGTGGAAACAGTATAACATTTGGTGATAATGACACTGGTATTAAGCAAAATGGTGATGGATTATTAGACATATATGCGAACGGCGTGCAAACTTTCCGTTTCCAAAACGGCGATTTGTACTCATACAAAAATATAAATGCTCCAAACGTTTATATTCGTTCTGATATTCGTTTAAAATCCAACTTTAAACCTATCGAAAATGCACTTGATAAAGTTGAAAAACTTAACGGTATCATTTACGATAAAGCTGAATACATCGGTGGAGAGGCAATTGAAACTGAAGCGGGTATTGTGGCTCAAACGTTGCAAGACGTTTTACCAGAAGCCGTCCGTGAAACAGAAGATAGCAAGGGTAATAAAATACTCACTGTTTCTTCTCAAGCCCAGATTGCTCTTCTAGTTGAAGCTGTGAAAACACTTTCTTCTCGTGTAAAAGAACTTGAATCTAAACTTATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d5f2009df79fa2f141592fad300b6fa4ed228756303b5a110bb722a089ac0c6d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2917
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50