Protein

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Genbank accession
YP_009600038.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,72
Seq2Symm
C1 confidence 0,964
C1 0,964
C2 0,012
I 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MLPFPIISSTPILEKLVITKIAAGQEHFLFLTSTGDVYGIGKNTYGQLGTGNTITQTDYVKVFSGARDIFCGERISFVIRDSDSAIMATGAVNSTGFSGNISTWQARTNLNVVAAKGVKKICASEKICAILCNDNTLYTVGSGYLGNGVYTSGLQSSLQNVANNAYDISVSTESMYYRDNNQNIYGVGEYWALNLPLTANNQATWASQYGGVYGDMFNPELKTHYRSCLIPGSDRTYAVGLSSFGQLGNNNIADMQGNRVYPITFYLVGKPLFFGSSRGAAYMTMIATADGIYYSGRNTNGNVGFPGAGSAFGTYRQISLSNVIGPSTFDATLIQSLESNQYCTYLLYNNKVFITGLAFDGTSSTSLVPVNIKG
Physico‐chemical
properties
protein length:374 AA
molecular weight: 40207,73610 Da
isoelectric point:7,51061
aromaticity:0,11765
hydropathy:-0,01845

Domains

View on InterPro
Domain architecture
YP_009600038.1
1 374 aa
STR 6–374
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009600038.1
1 374 aa
Domain Start End Length (AA) Confidence
N-terminal 1 44 44 0,2592
Central domain 45 273 230 0,8073
C-terminal 274 374 100 0,3678
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Serratia phage BF [NCBI] · taxon 1962671
Uroviricota Caudoviricetes Eneladusvirus Eneladusvirus BF
Host
Serratia marcescens [NCBI] · taxon 615
Pseudomonadota Gammaproteobacteria Enterobacterales Yersiniaceae Serratia Serratia marcescens

Coding sequence (CDS)

Genbank protein accession
YP_009600038.1 [NCBI]
Genbank nucleotide accession
NC_041917 [NCBI]
CDS location
range 349296 -> 350420
strand -
CDS
ATGTTACCATTTCCAATAATAAGTTCAACACCTATTTTAGAAAAATTAGTAATTACTAAAATTGCTGCTGGACAAGAACACTTCTTGTTCTTAACATCTACTGGTGATGTATATGGTATAGGAAAAAATACATATGGTCAACTTGGTACTGGAAATACAATAACACAAACAGATTATGTTAAAGTTTTTTCTGGTGCTAGAGATATATTTTGTGGAGAAAGAATATCATTTGTTATTCGAGATTCGGATTCAGCAATAATGGCAACTGGTGCAGTTAATAGTACCGGTTTTAGTGGAAATATATCTACATGGCAAGCTCGTACAAATTTAAATGTTGTAGCTGCTAAGGGGGTTAAAAAAATCTGTGCATCGGAAAAAATCTGTGCAATACTATGCAATGACAACACGTTATATACGGTAGGTAGTGGGTATCTAGGTAATGGAGTTTACACATCTGGTTTACAATCATCATTACAAAACGTTGCAAACAACGCATATGATATATCTGTTAGTACTGAAAGTATGTATTACAGAGATAATAATCAAAATATATATGGAGTTGGTGAGTATTGGGCATTGAACTTACCTTTAACTGCAAATAATCAAGCAACATGGGCTTCACAATACGGTGGTGTATATGGAGATATGTTTAACCCTGAACTTAAAACTCATTACAGATCATGTTTAATTCCTGGTTCAGACAGAACATATGCTGTTGGTTTATCATCTTTTGGTCAATTAGGGAATAATAATATTGCTGACATGCAAGGAAATAGAGTATATCCTATAACATTTTATTTGGTAGGAAAGCCTTTATTTTTTGGTAGTTCTCGTGGAGCAGCATATATGACTATGATTGCTACTGCTGATGGAATATATTATTCTGGAAGAAATACAAATGGTAATGTTGGTTTTCCTGGTGCAGGATCTGCATTTGGAACATATAGGCAAATATCATTATCAAATGTTATTGGTCCTTCCACATTTGATGCAACATTAATACAATCATTGGAGTCTAATCAATATTGTACATATTTGCTATACAATAATAAAGTTTTCATAACTGGTCTAGCATTTGATGGTACTAGTAGTACTTCATTAGTACCAGTTAATATAAAAGGATAA

Genome Context

Tertiary structure

YP_009600038.1
ESMFold structure
Source ESMFold
pLDDT 83.8
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Genome sequence of Serratia marcescens phage BF Casey,E., Fitzgerald,B., Mahony,J., Lugli,G., Ventura,M. and van Sinderen,D. — 28596386 GenBank