Protein

View in Explore
Genbank accession
YP_010110611.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MNKKISQFEVTTSFEDNDILTLVQDKTNKIIHKDDFETSLSGTFVTNERVDGIEEDVANLDTKVDNNYTDLSNKIVEGDTNVTNNLSSNINSYYDVLNNKIITLEDKHDKDLTEVNDTVQGWIDTIDDKSTKEQLQNLLNRLIEDENIITALADLIANGGGSGEAPGFHTQPTSTIFPLSGYYYNGDTSDLTTTDTLNQALSKLEGKIRSVEGSIGGDTKYMITSTDNTQPTDGNLYSARRSDLNYISKKVDDTANGYIKFLKGIQGGQTFREGFLGEGASLWPINGRWKLEVDDLFVRGRMTVNELLVNEIKATGGDILVSVADLEILDVTTTPDNDYKCTFDTQDGTVRNPFVEGDQAICQIFDGKNVKRYWRMVSEVGTDYVVLSDSVCEPGSSIPEPKDKIIQLGNRYPGNEDRRSAIMISARGTEGPSVTLYDNIDDFNLVGKDRTVIGKNSRFVGTLSQVSSNGDIIRVPIDRGQFIAGTTYYYYDRVSYNGSLWLCMATQTTSIPSKENDEWLLQVEKGEQGAAGADKAKWVEITGERLFMYDNPNFEGTPKPSVITLYCNTYNIENPVFTWVNRNTNETIGTSQALDVRPDMFGDLRNFVVRCTVVNGKESFYDETQVAKLGDGATGEDAFYIDLSNGNMTVPYDSSGNNPQITITDVYTYVYAYQGTSQLYIDSITAETIEGVATVTVDGDKVTLNTLGSPSARIRLTVNIGSMSFTKDLWINKVQNGENGFDGVDACYVLISGEQVFKYDKEGLVSPSQITLYASSYGIESPTYSWYWKIVGTDDWNLLENEITETLVVSPNGSYFNNSVNEVTFKVECTSALGGAVYQDMLTINKLYDGKDGESPYRGVLTNEAHTVAANWLGEVESSELAKASTNYYLYQGTRKLENSEYTITYTNLDNNAQNQLSIDTNNNKLTVARLGNSFDSTVFKVEFHVPASSSSPVVDVCDFTITKAKGGVPGDFEVSIYCRSNESQPNRPSMTSRPTSGGTYSNGNYWYTDAPSASGYAIWKSTALFDGETGLLKSGEQWTLPTKISGKDGQDGQNGAQGPAGPQGSPGDRGPAGDPGPALNFRGEYNKDATYYKTAELVDVVKRDGVYYMANKATITPGWSSSEWKSLNSFENIATGLLFAEEATIGGWRFSPASSSYFRSTNDVVCFYPSTDGITPFLAAGTGSNKGAISSGGTKITNSKAPLKLWADGIITVGDGSSSSRAGLTGVGTSSDSVRIWAGTNHGNRTSAPFRVLDNGSMVATNGTFTGNVTCTSLIAQNIDSGNFSIPGLKCAGRCNWTGSSTSFGYLFTTKELRMSPSRVATGRFRFTLSGAHSTDYVVLCSIDNPNTNVASGFRGSYQIGPRYSDHFDVHWFDTNGDAHDLTYFNVAFFSY
Physico‐chemical
properties
protein length:1393 AA
molecular weight: 152336,19760 Da
isoelectric point:4,62950
aromaticity:0,10122
hydropathy:-0,42886

Domains

Domains [InterPro]
DC_0204
STR
1–1187
DC_0204
G3DSA:1.20.5.320
STR
1050–1110
G3DSA:1.20.5.320
YP_010110611.1
1 1393
Architecture
STR
STR 1-1187 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010110611.1
1 1393
Domain Start End Length (AA) Confidence
N-terminal 1 1145 1145 0,8316
Central domain 1146 1344 200 0,5439
C-terminal 1345 1393 48 0,9718
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1145
Central
1146-1344
C-terminal
1345-1393

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr1_1
[NCBI] 		2772064 Uroviricota > Caudoviricetes > Crassvirales > Boorivirinae > Culoivirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010110611.1 [NCBI]
Genbank nucleotide accession
NC_055873 [NCBI]
CDS location
range 1739 -> 5920
strand -
CDS
ATGAATAAAAAGATATCACAATTTGAGGTTACCACATCTTTTGAAGATAATGATATTCTAACTCTTGTACAAGATAAAACTAATAAGATAATCCATAAAGATGATTTTGAAACTAGTTTATCTGGTACATTTGTAACTAATGAAAGAGTAGATGGTATTGAAGAAGATGTAGCTAATCTTGATACTAAAGTAGACAACAATTACACAGATCTATCCAACAAAATAGTAGAAGGGGATACTAATGTTACTAATAACCTGAGTAGTAATATTAATAGTTATTATGATGTATTAAACAATAAGATCATTACTCTTGAAGATAAACATGATAAGGATTTAACTGAAGTTAATGATACAGTACAGGGTTGGATAGATACTATTGATGATAAGTCTACAAAGGAACAATTACAAAACCTATTAAATAGGTTAATTGAAGATGAAAACATCATTACAGCATTAGCAGATTTAATTGCAAATGGTGGTGGTAGTGGTGAAGCACCCGGTTTTCATACACAACCTACTAGTACCATATTTCCATTATCAGGGTACTATTATAATGGTGATACTAGTGATTTAACTACTACAGATACTTTAAATCAAGCTTTATCAAAACTAGAAGGTAAAATTAGATCTGTAGAAGGTAGCATAGGTGGTGATACAAAATATATGATCACTAGTACCGACAATACTCAACCTACAGATGGTAATTTATATTCAGCTAGAAGATCTGATTTAAACTATATATCTAAAAAGGTTGACGATACAGCAAATGGTTATATCAAGTTTTTAAAAGGAATACAGGGAGGTCAAACATTTAGAGAAGGTTTTCTAGGTGAGGGCGCTAGTTTATGGCCGATTAACGGTAGATGGAAGTTAGAAGTAGACGATTTATTTGTTAGAGGTAGAATGACTGTTAATGAACTTCTAGTAAATGAAATAAAAGCTACTGGTGGAGATATATTAGTTTCAGTTGCTGATCTTGAAATACTAGATGTTACTACTACTCCAGATAATGATTATAAATGTACATTTGATACTCAGGACGGTACTGTAAGAAATCCTTTTGTTGAAGGAGATCAGGCTATATGTCAAATCTTTGATGGTAAAAATGTTAAAAGATATTGGCGCATGGTATCCGAAGTAGGTACTGATTATGTGGTTTTATCTGATTCTGTATGCGAACCTGGTAGTTCTATTCCTGAACCCAAAGATAAAATTATTCAGTTAGGTAATAGATATCCTGGTAATGAAGATCGTAGATCAGCTATTATGATATCTGCTAGAGGTACAGAAGGACCCAGTGTTACTTTATATGATAATATTGATGATTTTAATTTAGTAGGTAAAGATCGTACAGTTATAGGTAAAAATAGTAGATTCGTTGGTACTTTATCTCAAGTATCTAGTAATGGAGATATTATAAGAGTACCTATCGATAGAGGACAATTTATAGCTGGTACTACGTATTATTATTATGATAGAGTATCATATAATGGTTCACTGTGGTTATGTATGGCTACTCAAACCACTAGTATCCCTAGTAAAGAAAATGATGAATGGCTGTTGCAAGTAGAAAAGGGTGAGCAAGGTGCTGCTGGTGCAGATAAAGCTAAATGGGTGGAAATTACAGGTGAAAGATTGTTCATGTATGATAATCCTAATTTTGAAGGTACTCCTAAACCATCTGTCATTACACTATATTGTAATACTTATAATATAGAAAATCCTGTATTTACTTGGGTAAATAGAAATACAAATGAAACCATAGGTACTTCTCAAGCATTGGATGTACGTCCTGATATGTTTGGTGATCTTAGAAATTTTGTAGTACGTTGTACTGTAGTTAATGGTAAAGAAAGTTTTTATGATGAAACTCAGGTAGCCAAACTCGGAGATGGTGCAACTGGAGAAGATGCTTTCTATATTGACCTAAGTAATGGTAATATGACGGTACCTTACGATTCATCTGGCAATAATCCACAAATTACTATTACTGATGTATATACTTATGTGTATGCATATCAGGGTACGAGTCAATTATATATTGATAGTATAACAGCAGAAACTATTGAAGGTGTAGCTACTGTTACTGTAGATGGTGATAAAGTGACATTAAATACTTTAGGATCACCTTCTGCTAGAATACGATTAACAGTTAATATCGGTTCCATGTCCTTTACTAAGGATTTATGGATTAATAAAGTACAAAATGGTGAGAATGGGTTTGATGGAGTCGACGCTTGTTATGTATTAATATCAGGAGAGCAGGTATTTAAGTACGATAAAGAAGGTTTAGTTAGCCCATCACAAATAACTTTATATGCTAGTTCGTATGGGATTGAATCTCCTACTTATTCTTGGTATTGGAAAATCGTAGGTACAGATGATTGGAATCTTCTTGAAAATGAGATTACAGAAACTTTAGTAGTATCACCAAACGGTTCATACTTTAATAATTCTGTTAACGAAGTAACTTTTAAAGTAGAATGTACTTCTGCTTTAGGAGGAGCTGTATATCAGGATATGTTAACAATTAATAAATTGTATGATGGAAAAGATGGAGAAAGCCCATATAGAGGTGTATTAACTAATGAAGCTCATACAGTAGCTGCTAATTGGTTAGGAGAAGTAGAATCATCAGAATTAGCAAAAGCTTCTACTAATTATTATTTATATCAAGGTACTAGAAAATTAGAAAATAGTGAATATACTATAACTTATACTAATTTAGATAACAATGCTCAAAATCAATTATCTATTGATACAAATAATAATAAACTTACCGTAGCTAGATTAGGTAATAGTTTTGATAGTACAGTATTTAAAGTAGAATTTCATGTACCAGCTTCTTCATCTTCTCCAGTAGTAGATGTATGTGATTTTACTATTACAAAAGCCAAAGGTGGAGTTCCTGGTGATTTTGAAGTATCTATTTATTGTAGATCTAATGAGTCTCAACCGAATCGACCTTCCATGACATCTAGACCTACTTCTGGTGGTACCTATAGTAATGGTAACTATTGGTATACAGATGCTCCTTCAGCAAGTGGTTATGCTATATGGAAAAGTACTGCTTTATTTGATGGAGAAACTGGTTTACTTAAGTCTGGAGAACAGTGGACATTACCTACAAAAATATCAGGTAAAGATGGACAAGATGGGCAGAATGGTGCTCAAGGACCTGCTGGACCACAAGGATCTCCCGGAGATAGAGGTCCTGCTGGAGATCCAGGTCCTGCGTTAAATTTTAGAGGAGAATATAATAAGGATGCTACTTATTATAAAACAGCAGAATTGGTAGATGTCGTAAAAAGAGATGGAGTATATTATATGGCAAATAAAGCTACAATTACACCGGGTTGGTCTAGTTCTGAATGGAAATCATTAAATTCATTTGAGAATATTGCAACCGGTTTGTTATTTGCTGAAGAAGCTACAATTGGTGGATGGCGCTTTAGTCCAGCTTCTAGTAGTTATTTTAGATCAACAAATGATGTAGTGTGTTTCTATCCATCTACAGATGGTATAACTCCATTTTTAGCAGCAGGTACTGGTTCAAATAAAGGTGCTATTTCTTCTGGTGGTACTAAAATCACAAACTCAAAAGCTCCTTTAAAATTATGGGCAGATGGTATCATTACAGTAGGAGATGGTTCTAGCAGTTCTAGAGCAGGATTAACTGGGGTAGGAACTTCTTCAGACTCTGTAAGAATCTGGGCAGGTACAAATCATGGTAATAGAACATCTGCTCCTTTTAGAGTACTTGATAATGGTAGTATGGTAGCAACAAATGGTACATTTACTGGAAATGTTACTTGTACTTCTTTAATTGCTCAAAATATTGATTCTGGTAATTTCTCAATACCCGGATTGAAGTGTGCAGGTAGATGTAACTGGACTGGGTCTAGCACATCGTTTGGATATTTATTTACTACTAAGGAACTTAGAATGTCTCCTTCTAGGGTTGCTACAGGTAGATTTAGATTTACATTATCAGGTGCACATAGTACTGATTATGTTGTATTGTGTTCTATTGATAATCCAAATACAAATGTAGCTAGTGGCTTTAGAGGTTCATATCAAATTGGTCCTAGATATTCTGATCATTTTGATGTTCATTGGTTTGATACTAATGGTGATGCCCATGATTTAACTTATTTTAATGTTGCATTTTTTTCGTATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
24873bc245cdc7d5cf079ecaffbdcc0960900798410f3a08722295910e8599a1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6494
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank