Protein

View in Explore
Genbank accession
YP_009322954.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MANFNKSFNFRGGFQVDETTFIVRGEKVGIGSSVPDTLLDVNGTITAKGLAIDSSADVIIESANVGFLSATTIHVGVASISAGIITSATPTGIVTYYGDARFLQGLPTSQWIDTDVGLGYTSIYAAGNVGVDTTDPRYAFQVGGVPFPTIDGPPLPAQDGVGIENGNVYASGIVSTRGEFIGLGSNITAIDGSNITVGAIGSMAYGPLIVTEEVIADRFTGIASTAISVTPDATLEFDTATANEFNAVNRFVSTTGKLQIGDDSTSSAVGDIDVFKTGSNSSVYSLSNQVSKLFVGAQRQSGQARQFGGLRHGLVGSDPLTQINDLDLVNYDIGNLNFYLHSGSGGPGITTGAFRWIYGQTGFSLAELSKEGVFSLKGNGVSGSIVLEVAGISSFSDAVYINGDLNVPAGNNVDIGADITVSGNFDFSGSTITFPDQVTMEELIISDTLTVGNPLSDFVTITSTQISNGNSIIGNGTINSTSIQGDTINGTSVNATELQYTTSLVGPQFSINSLGDLQASSITSASASLSSIISTDITTGSLSVTSSLSAINANVTTITSDTVNSTNINGTTLDISGTSTLNDISSNSIDTPLANITAVNTNSIAPLSSSSISIPGDIDGAGNGTITDFSELNSNLVNCTTLRVDQIEIAPGLFSSTSVRLTFTSDSVPDGAYVDLTLTPLPSN
Physico‐chemical
properties
protein length:684 AA
molecular weight: 70151,41250 Da
isoelectric point:4,05003
aromaticity:0,06725
hydropathy:0,14678

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009322954.1
1 684
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,9462
Central domain 233 673 442 0,1637
C-terminal 674 684 10 0,3163
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-673
C-terminal
674-684

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM7
[NCBI] 		1883368 Uroviricota > Caudoviricetes > Pantevenvirales > Mazuvirus > Mazuvirus scam7
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009322954.1 [NCBI]
Genbank nucleotide accession
NC_031927 [NCBI]
CDS location
range 26561 -> 28615
strand +
CDS
ATGGCTAATTTTAATAAGTCCTTCAATTTTAGAGGTGGATTCCAGGTCGATGAAACAACTTTCATCGTCCGTGGAGAGAAGGTGGGCATTGGTTCCAGTGTCCCCGATACTCTCCTAGATGTAAATGGAACCATCACAGCTAAAGGACTGGCTATTGATTCTAGTGCTGATGTTATTATAGAGAGTGCGAATGTAGGCTTCTTAAGTGCTACAACTATTCACGTTGGTGTTGCTTCTATTAGTGCTGGTATTATTACATCAGCAACTCCAACTGGAATCGTCACATACTATGGCGATGCAAGATTTTTACAAGGACTACCAACTTCGCAGTGGATTGATACTGATGTTGGGTTAGGCTACACAAGTATCTACGCAGCTGGTAATGTTGGTGTAGATACAACAGATCCCCGTTATGCCTTCCAGGTTGGTGGTGTTCCTTTCCCCACCATAGATGGACCACCACTACCCGCACAGGATGGCGTAGGTATTGAGAATGGTAATGTATATGCTTCTGGTATTGTATCTACCCGTGGTGAGTTTATTGGTTTAGGTAGTAATATCACTGCTATTGATGGTAGTAATATTACTGTTGGTGCTATTGGTTCTATGGCTTATGGTCCTCTAATTGTAACAGAGGAAGTCATTGCTGATAGGTTCACTGGTATTGCTTCTACAGCTATTAGTGTAACTCCTGATGCTACACTAGAGTTTGATACTGCAACAGCTAATGAGTTTAACGCAGTAAATAGATTCGTATCTACCACAGGTAAGCTACAGATAGGTGATGACTCAACATCTTCCGCTGTAGGTGATATTGATGTATTTAAGACTGGTTCTAATTCATCAGTATATTCACTATCAAATCAAGTATCCAAGCTATTTGTAGGGGCACAAAGACAATCTGGTCAGGCTAGGCAGTTCGGTGGACTACGACACGGATTAGTTGGTAGCGACCCACTCACTCAAATTAATGACCTTGACCTAGTAAACTATGATATTGGTAATCTAAACTTTTATCTACACTCTGGTAGTGGTGGTCCAGGTATTACTACTGGTGCTTTCCGCTGGATATATGGTCAGACTGGCTTCTCTCTAGCAGAACTATCCAAAGAAGGTGTATTTTCACTGAAAGGTAATGGTGTTTCTGGTTCTATTGTATTGGAAGTTGCTGGTATCTCTAGTTTTTCTGACGCAGTATATATTAACGGAGACTTAAACGTTCCCGCAGGGAATAATGTTGATATTGGTGCTGATATAACTGTTAGTGGTAATTTTGACTTTAGTGGTAGTACTATAACCTTCCCAGATCAAGTTACAATGGAAGAATTGATAATAAGTGATACTCTCACAGTTGGTAATCCATTATCAGATTTTGTAACTATTACATCAACGCAAATATCTAATGGAAATAGTATTATTGGTAATGGCACTATCAACTCTACTTCAATTCAGGGTGATACAATTAATGGTACATCTGTAAATGCAACAGAATTACAATATACCACATCTTTAGTTGGTCCTCAATTCTCAATAAATTCTCTGGGTGATCTACAGGCATCTTCAATAACATCTGCATCTGCATCATTATCATCAATTATATCCACAGATATTACTACTGGCAGTCTTTCTGTTACTAGCTCTTTATCTGCAATTAATGCAAATGTAACTACAATTACTTCGGATACGGTTAATTCCACTAATATTAATGGAACAACATTGGATATTTCGGGAACCAGTACATTAAATGATATATCTTCCAATTCTATAGATACCCCTTTAGCAAATATAACTGCGGTTAATACTAATAGTATTGCTCCACTTAGTTCATCATCTATCTCTATACCTGGAGATATTGATGGCGCTGGAAATGGAACTATCACAGATTTTAGTGAATTGAATTCTAATTTAGTTAACTGTACAACACTTAGAGTTGATCAAATTGAGATCGCCCCAGGATTGTTTAGTTCAACTAGCGTTAGATTGACCTTCACTAGTGATTCAGTTCCCGATGGTGCTTATGTTGATCTTACATTGACCCCACTTCCATCTAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b003b8cd222472e8a1bc896ee041a19b1fafcf9aa1fbdd6f22883ee63accedce
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4909
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50