Protein

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Genbank accession
YP_008241376.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MPQEVVAQFDRKFNNPIETNRAVETIGQRDSIPTLTRWEGMLCYVESEDTTYQLTGVIDNTGWQALVGLSDAPEDGQQYARKDGAWVLAYTQEYSSYDKSYAVTIAGSASPAPTSHTTTATVNVKEYVDRYIVKGTLQLSYATLTGLNFNKFILSIITDLDWEYFPNDTVPGTYFDTSIIGNLNIIAGTSKILSLQGTFMVQDDRASSSNVYVQFNRTMYKF
Physico‐chemical
properties
protein length:222 AA
molecular weight: 24853,39300 Da
isoelectric point:4,55669
aromaticity:0,12162
hydropathy:-0,28694

Domains

Domains [InterPro]
DC_0772
STR
3–218
DC_0772
SSF58046
ATT
65–89
SSF58046
G3DSA:6.20.230.10
ATT
68–90
G3DSA:6.20.230.10
YP_008241376.1
1 222
Architecture
STR
ATT
STR
STR 3-64 | ATT 65-90 | STR 91-218 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi17:1
[NCBI] 		1327980 Uroviricota > Caudoviricetes > Helsingorvirus >
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008241376.1 [NCBI]
Genbank nucleotide accession
NC_021795 [NCBI]
CDS location
range 34939 -> 35607
strand +
CDS
ATGCCACAAGAAGTAGTCGCACAATTTGACAGAAAATTTAACAACCCTATTGAGACTAATAGGGCTGTTGAGACGATAGGACAAAGAGACTCAATCCCAACTCTAACAAGATGGGAGGGCATGCTTTGCTATGTAGAGTCTGAGGATACGACATATCAATTAACAGGAGTTATTGATAATACAGGATGGCAGGCCCTTGTAGGTTTGTCAGATGCCCCTGAGGATGGGCAACAATACGCCCGCAAAGATGGGGCCTGGGTTTTAGCTTATACTCAAGAATACTCATCTTATGATAAGAGTTATGCTGTCACTATAGCAGGGAGTGCAAGTCCGGCTCCTACATCACACACAACAACAGCTACGGTAAATGTAAAGGAGTACGTGGATAGGTATATCGTAAAAGGAACTTTACAGCTATCTTATGCAACCTTAACTGGGCTTAATTTTAATAAATTTATATTAAGCATAATTACGGATTTAGACTGGGAGTATTTCCCTAATGATACAGTGCCTGGGACTTATTTTGATACATCTATTATAGGTAATTTAAACATAATTGCAGGAACATCAAAAATACTTAGTCTGCAGGGGACATTTATGGTGCAAGATGATAGGGCGTCATCAAGTAACGTTTATGTACAATTTAATAGGACAATGTATAAATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
13f54b442d8eeb85d447eb10d0183d27a46895946fea38b6ef10b9739d8af727
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5483
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50