Protein

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Genbank accession
YP_010302884.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MRTGNQQLLIGAQIKNFRPEVLTADPDVASLVAGQTAVIWFNSTEGKYKYFNGTTIEKLGGDAELPQGIVLADGTVAMTDDLELSSDDQSGSDDKAAVSKKHVATVVATAVGGKQDKFTGLTENDVVIAGPNNTLVTSNITGAELGYLDGVTSLIQTQLDSKLSKDNAQLSSALDANGNKISNLAAPTNNNDAARKIDIDNALSGMNWQEDINGIQTDATLQPTKAEGSRYVITNAAALHADFGTIADVQNNAIVEADADGEYHVVFDPTAARADGAIAWNHATTQYVRFDGTAWAVFGGMSSIAPGDGLELDGNALNVQVDRALTIVGNNVGINVAAAGGVFVNGTNELAVKRDGNSLASGADGLKVADGGVGYAQLAAAAFGTGLKQDTTAKTIVIDEAALKTLGFIDEEGGSVKALTLTGTAALTDASVVSKKYVDDAITAGGAAGAAKLYVYNKTAAEDTAAAVHTFTHNAGTKLGVVTVTDETGYQIIPDEVIFVDANTLRVEITEAKKLAIAFVTLPVVAA
Physico‐chemical
properties
protein length:527 AA
molecular weight: 54296,69040 Da
isoelectric point:4,44898
aromaticity:0,05503
hydropathy:-0,00474

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010302884.1
1 527
Domain Start End Length (AA) Confidence
N-terminal 1 244 244 0,9844
Central domain 245 443 200 0,1114
C-terminal 444 527 83 0,9889
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-244
Central
245-443
C-terminal
444-527

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_5
[NCBI] 		2797313 Uroviricota > Caudoviricetes > Rivsvirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010302884.1 [NCBI]
Genbank nucleotide accession
NC_061450 [NCBI]
CDS location
range 57070 -> 58653
strand -
CDS
ATGCGTACTGGTAATCAACAGCTTTTAATCGGCGCACAGATTAAAAACTTCCGTCCCGAAGTATTGACTGCCGATCCAGATGTTGCAAGTCTGGTAGCTGGTCAGACGGCCGTTATCTGGTTTAACTCTACCGAAGGCAAGTATAAATACTTCAACGGTACCACTATCGAAAAGCTGGGTGGCGACGCTGAACTGCCTCAAGGCATTGTGCTGGCTGACGGTACCGTAGCCATGACCGATGACCTTGAACTGTCTTCTGATGACCAGTCCGGTTCTGATGACAAAGCTGCCGTGTCTAAAAAGCACGTTGCAACAGTTGTCGCTACAGCGGTTGGCGGCAAGCAAGACAAGTTCACCGGTCTGACTGAAAACGATGTTGTTATCGCAGGTCCGAACAACACTCTGGTGACCAGCAACATTACTGGCGCAGAGCTGGGTTATCTGGATGGCGTTACCTCCCTGATTCAGACTCAGTTAGACAGCAAACTGTCGAAAGACAATGCTCAGTTGAGTTCTGCGCTGGATGCCAACGGTAACAAAATCTCTAACCTGGCGGCTCCTACAAACAACAACGATGCCGCTCGTAAGATTGATATCGATAACGCCCTGAGTGGTATGAACTGGCAGGAAGATATCAACGGCATTCAGACTGATGCTACCCTGCAGCCAACCAAAGCAGAAGGCAGCCGTTATGTAATCACCAATGCTGCTGCGCTGCACGCTGACTTTGGTACCATTGCTGATGTTCAGAACAACGCAATCGTTGAAGCAGACGCGGATGGCGAATACCACGTTGTGTTTGACCCGACTGCTGCCCGTGCTGATGGTGCTATCGCATGGAACCATGCTACTACTCAGTATGTTCGTTTCGACGGTACTGCGTGGGCTGTGTTTGGCGGTATGTCCAGCATCGCTCCGGGTGATGGTCTGGAACTCGATGGCAACGCACTCAATGTGCAGGTTGACCGTGCTCTGACTATCGTTGGTAACAACGTTGGTATTAACGTTGCTGCTGCTGGTGGTGTGTTTGTTAACGGTACCAACGAGCTGGCAGTTAAACGCGATGGTAATTCTCTGGCTAGCGGTGCTGATGGTCTGAAAGTTGCTGACGGTGGCGTGGGTTATGCTCAGCTTGCTGCTGCTGCATTCGGCACAGGTCTGAAACAGGACACCACAGCCAAGACCATCGTTATCGATGAAGCTGCATTGAAAACTCTGGGCTTCATTGACGAAGAAGGCGGCAGTGTTAAAGCACTGACCCTGACCGGTACTGCTGCCCTGACCGACGCAAGTGTTGTCAGCAAGAAATATGTTGATGATGCTATCACTGCTGGTGGCGCTGCTGGTGCTGCTAAACTGTACGTGTACAACAAAACTGCTGCGGAAGATACTGCTGCTGCTGTTCACACGTTTACCCACAACGCAGGCACCAAGCTGGGCGTTGTCACAGTTACCGATGAAACTGGCTATCAGATCATCCCTGATGAAGTCATTTTCGTTGATGCAAACACCCTGCGCGTCGAAATCACCGAAGCTAAAAAGCTGGCTATCGCGTTTGTTACTCTGCCTGTAGTTGCTGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
450d2d338131ed789ccbbef5ea9151fa7ca49e692b578264c23dc0ff80f2433f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7070
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_5 Kim,S.G., Lee,S.B., Kwon,J. and Park,S.C. 2021-01-07 — GenBank