Protein

View in Explore
Genbank accession
YP_007518185.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,33
Seq2Symm
I confidence 0,755
I 0,755
H 0,039
C2 0,010
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAQWNKNTQDFLNQERTLFEVPLLATKDGNVVDNYNRLPVSINPDAFGRTRISQPLTLFDSSHRYRDNNLWETGITGTASATFSATEGLVNLTVDNASGTQIIRETTKTFSYQPGKSLLVMNTFVPATPQENLRQRVGYFGADNGMYFEINGTTPYFVERSLSTGTQTEVAQANWNIDKLDGTGVSGITLDITKAQILWMDIEWLGLGTVRMGFVIDGQFIHAHSFHHANYIQSTYITTASLPLRCELTNTGATSGSSTMKQVCSTVISEGGYELRGLQQAVQTPITAPVDLPSPAGTYYPVVSIRLKSSPDRLDAIVILTALSIMGIGNGPEYNWQVRASATTTGGTWTSAGVDSAVEYKIDGGTVSGGRVLASGFFSSSQQSSTTVNILKEALFKFQLERNGLTGTPYELTLVCATNSAGADVFASLDWEEISR
Physico‐chemical
properties
protein length:436 AA
molecular weight: 47379,44870 Da
isoelectric point:5,07682
aromaticity:0,09174
hydropathy:-0,16881

Taxonomy

Phage
Synechococcus phage S-RIM8 A.HR1 [NCBI] · taxon 869724
Uroviricota Caudoviricetes Pantevenvirales Neptunevirus Neptunevirus srim18
Host
Synechococcus sp. WH 7803 [NCBI] · taxon 32051
Bacteria Cyanobacteria Oscillatoriophycideae Chroococcales Synechococcus

Coding sequence (CDS)

Genbank protein accession
YP_007518185.1 [NCBI]
Genbank nucleotide accession
NC_020486 [NCBI]
CDS location
range 94435 -> 95745
strand +
CDS
ATGGCACAGTGGAATAAGAACACCCAAGATTTCTTAAATCAAGAAAGAACTCTTTTTGAGGTTCCTTTATTAGCAACCAAAGATGGAAACGTTGTAGATAATTACAATCGTCTGCCAGTTTCCATAAATCCTGATGCTTTCGGTCGTACAAGAATATCTCAACCCCTCACTCTATTTGATAGTTCCCACAGATACAGAGATAATAATCTGTGGGAAACTGGTATTACTGGCACGGCTTCTGCTACCTTTAGTGCTACTGAAGGTCTGGTAAATCTAACAGTTGATAATGCTTCTGGAACACAGATTATTCGTGAGACCACAAAGACATTCTCATACCAACCAGGCAAATCTTTGCTTGTAATGAATACCTTTGTTCCTGCCACACCACAAGAAAACTTGAGACAGAGAGTTGGATATTTTGGTGCTGACAATGGAATGTATTTTGAGATTAATGGCACGACACCTTACTTTGTAGAAAGGAGTTTATCTACTGGAACACAAACAGAAGTAGCACAAGCAAATTGGAATATTGATAAGTTAGATGGCACTGGTGTTTCTGGTATTACATTAGATATCACCAAAGCACAAATTCTTTGGATGGATATTGAGTGGTTGGGTCTTGGCACAGTCAGAATGGGATTTGTGATTGATGGTCAATTTATTCACGCACATTCATTTCATCACGCAAATTATATCCAATCAACTTATATCACAACAGCATCATTACCTTTGAGATGTGAGCTTACTAATACTGGTGCTACAAGTGGTAGTAGCACGATGAAGCAAGTTTGCTCTACCGTGATTTCTGAAGGTGGTTATGAGTTGCGTGGATTACAACAAGCAGTTCAAACACCAATCACAGCACCAGTAGATTTACCTTCTCCTGCGGGAACTTATTATCCTGTTGTTTCTATCCGTCTCAAATCTTCTCCAGATAGATTAGATGCTATTGTAATTTTGACAGCACTATCAATAATGGGTATTGGAAATGGACCAGAATACAACTGGCAAGTGAGAGCATCGGCAACGACTACTGGGGGCACTTGGACGAGTGCTGGTGTTGATAGTGCTGTGGAATATAAGATTGATGGAGGAACTGTAAGTGGTGGAAGAGTTCTAGCATCTGGTTTCTTCTCATCATCACAGCAATCTTCCACAACAGTAAATATTCTGAAAGAAGCACTATTCAAGTTTCAGTTAGAAAGAAATGGATTGACTGGAACTCCTTATGAATTGACACTTGTATGCGCCACTAATAGTGCTGGTGCTGATGTTTTTGCTTCCCTGGACTGGGAAGAAATTAGTAGGTAA

Genome Context

Tertiary structure

YP_007518185.1
ESMFold2 structure
Source ESMFold2
pLDDT 86.8
Oligomeric state monomer
Download structure