Protein

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Genbank accession
AXG66823.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MVEKVDLSLIKTDADGEVYSGDGGLNIREISDDTLSGNFDRLSGTLVLNIPNIGKVSIPGFTTPNDIGLGPIGPGGEDGRDGIDGLSGSDGGRGSDGCPGPRGNDGLPGRQGVRGSRGNIGPTGATGATGPSGKDGVVAVFIQATDPSLDRIVEPGSIWVRTSS
Physico‐chemical
properties
protein length:164 AA
molecular weight: 16415,82660 Da
isoelectric point:4,40124
aromaticity:0,03049
hydropathy:-0,33659

Domains

Domains [InterPro]
DC_0479
ATT
2–75
DC_0479 IPR008160
DC_0094
STR
54–157
DC_0094
AXG66823.1
1 164
Architecture
ATT
STR
ATT 2-75 | STR 76-157 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoM_JA29
[NCBI] 		2283031 Uroviricota > Caudoviricetes > Salmondvirus >
Host Dickeya solani MK10
[NCBI] 		1224151 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Pectobacteriaceae > Dickeya > Dickeya solani

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXG66823.1 [NCBI]
Genbank nucleotide accession
MH460461.1 [NCBI]
CDS location
range 64074 -> 64568
strand -
CDS
ATGGTTGAAAAAGTTGATCTCAGTTTAATTAAAACTGACGCAGACGGCGAAGTTTATTCTGGCGATGGTGGTTTAAACATTCGCGAAATTTCTGACGATACTCTCAGCGGAAATTTTGATCGTCTAAGCGGAACACTTGTTTTAAATATTCCTAACATCGGAAAAGTTTCAATTCCCGGATTCACAACTCCAAACGATATTGGATTAGGGCCAATTGGCCCCGGCGGTGAAGATGGTCGCGATGGTATCGACGGCTTATCTGGATCTGATGGCGGTCGTGGTTCTGATGGTTGCCCGGGGCCACGCGGTAATGATGGTTTACCGGGCAGACAAGGTGTTCGAGGATCTCGCGGAAATATTGGCCCGACTGGTGCAACTGGTGCAACTGGCCCAAGTGGAAAAGATGGCGTTGTTGCTGTATTTATTCAAGCTACCGATCCATCACTTGATCGCATCGTGGAACCCGGATCGATTTGGGTAAGAACATCTTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
005591e1b31f5509e7a7f25c32da011ce45ea3cea57e203df693ef0791730a8e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7437
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank