Protein

View in Explore
Genbank accession
AXG66823.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence Phold
Probability 1,00
Protein sequence
MVEKVDLSLIKTDADGEVYSGDGGLNIREISDDTLSGNFDRLSGTLVLNIPNIGKVSIPGFTTPNDIGLGPIGPGGEDGRDGIDGLSGSDGGRGSDGCPGPRGNDGLPGRQGVRGSRGNIGPTGATGATGPSGKDGVVAVFIQATDPSLDRIVEPGSIWVRTSS
Physico‐chemical
properties
protein length:164 AA
molecular weight: 16415,82660 Da
isoelectric point:4,40124
aromaticity:0,03049
hydropathy:-0,33659

Domains

Domains [InterPro]
IPR008160
85–136
IPR008160
AXG66823.1
1 164
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoM_JA29
[NCBI] 		2283031 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXG66823.1 [NCBI]
Genbank nucleotide accession
MH460461 [NCBI]
CDS location
range 64074 -> 64568
strand -
CDS
ATGGTTGAAAAAGTTGATCTCAGTTTAATTAAAACTGACGCAGACGGCGAAGTTTATTCTGGCGATGGTGGTTTAAACATTCGCGAAATTTCTGACGATACTCTCAGCGGAAATTTTGATCGTCTAAGCGGAACACTTGTTTTAAATATTCCTAACATCGGAAAAGTTTCAATTCCCGGATTCACAACTCCAAACGATATTGGATTAGGGCCAATTGGCCCCGGCGGTGAAGATGGTCGCGATGGTATCGACGGCTTATCTGGATCTGATGGCGGTCGTGGTTCTGATGGTTGCCCGGGGCCACGCGGTAATGATGGTTTACCGGGCAGACAAGGTGTTCGAGGATCTCGCGGAAATATTGGCCCGACTGGTGCAACTGGTGCAACTGGCCCAAGTGGAAAAGATGGCGTTGTTGCTGTATTTATTCAAGCTACCGATCCATCACTTGATCGCATCGTGGAACCCGGATCGATTTGGGTAAGAACATCTTCGTAA

Tertiary structure

PDB ID
005591e1b31f5509e7a7f25c32da011ce45ea3cea57e203df693ef0791730a8e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7437
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank