Protein

View in Explore
Genbank accession
QXO12467.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TSP
Evidence RBPdetect2
Probability 0,50
Seq2Symm
C3 confidence 0,999
C3 0,999
C1 0,007
D3 0,002
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSATRIKGAEGVIIESQYFLELPKAPTKQTTSAERAGMIRYNSEWKSFEGVLEFTDGSVSYRRFANLDENGQLLTSQLPDSVTSGMQYIGTYSPLTDDIDPPLGGQYDKLPAPIAANSGQYYIVRGLYDAAQAHFKANNPTTPTVTFIPTNPSGQGNWIQIKYYVDTDPMNPSTGKVVIAAFGRIITASIPSTGHEGLTSLSTDTTLTAAFTTDVDKSSELALTDGDWIISDGSKQTRLRQSRVSISAGAVSFDRTYATTSGRAFSSSAGTVQTIIDNLVQDGLRRTGDSMYDDGGIGDGRLGVVYGTAAAPAIAFNSNPFNPTTNPGNDPTKWSETSTGIFRPATGSIGFSASGVERLRVSPTQLILYPSTGTAAAPNILFSATGNTALGINVTGNKIDFVSNSAVNVSLSQGLSTFNGNVVVTGNHTVNGNTTLGNDASASGDKVVVNSQSRFNGISTFAADAYLQNSANLLIFTGSTIRFNSANSPTTIDETNGLTFSQTGSTGNYNFILYNGASPQVVAKMTRNGFALPVMNPIDDSKGEDGMIAYSTQRNTVIQKSNGTWTTVGSGGGVITTFTTANWVLNGSYYTFTITNANIQQVSVQELSGVNYSPVEVDSVVISPTNAVLSVPASPDLRFNGRVIVQYQ
Physico‐chemical
properties
protein length:648 AA
molecular weight: 68523,95800 Da
isoelectric point:4,97821
aromaticity:0,08642
hydropathy:-0,19367

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QXO12467.1
1 648 aa
Domain Start End Length (AA) Confidence
N-terminal 1 291 291 0,9362
Central domain 292 490 200 0,2797
C-terminal 491 648 157 0,8762
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Erwinia phage pEa_SNUABM_49 [NCBI] · taxon 2859284
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Erwinia amylovora [NCBI] · taxon 552
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
QXO12467.1 [NCBI]
Genbank nucleotide accession
MW879344 [NCBI]
CDS location
range 129394 -> 131340
strand -
CDS
ATGAGTGCTACTAGAATTAAAGGTGCAGAGGGTGTTATAATTGAAAGTCAATACTTTTTAGAACTACCTAAAGCACCAACAAAACAAACAACATCTGCTGAAAGAGCAGGTATGATTCGATATAACTCAGAATGGAAATCATTTGAAGGTGTTCTAGAGTTTACTGATGGCTCAGTGAGTTATCGTCGTTTCGCAAATTTAGATGAAAATGGACAATTACTTACATCCCAATTACCAGATTCAGTAACAAGTGGTATGCAGTATATTGGTACATATTCACCATTAACTGATGACATTGATCCACCATTGGGTGGACAATATGATAAACTTCCTGCACCCATTGCAGCTAATTCAGGACAGTACTATATTGTGCGTGGCCTATATGATGCAGCACAGGCACACTTTAAAGCAAATAACCCAACAACTCCAACTGTTACCTTTATACCTACTAATCCAAGTGGACAAGGAAATTGGATTCAAATTAAGTACTATGTTGATACCGATCCAATGAACCCAAGTACTGGTAAAGTTGTTATTGCCGCTTTTGGAAGAATAATTACAGCAAGTATTCCAAGTACTGGTCATGAAGGTTTAACATCATTATCTACTGACACAACGTTAACAGCCGCATTTACTACTGATGTAGATAAGTCTTCTGAATTAGCGTTGACGGATGGTGATTGGATTATTTCAGATGGTTCCAAACAAACACGTTTACGTCAAAGTCGTGTTAGTATAAGTGCTGGTGCAGTTTCATTCGATAGAACATATGCAACTACTTCAGGTAGAGCATTTTCTTCAAGTGCTGGTACAGTACAAACTATTATAGATAACCTTGTGCAAGACGGTCTACGCCGCACAGGAGACTCCATGTACGACGATGGAGGAATAGGTGATGGTCGCTTAGGTGTTGTTTATGGAACCGCTGCTGCCCCTGCTATTGCGTTTAACAGCAACCCATTTAACCCTACCACGAATCCAGGAAATGATCCTACTAAATGGTCAGAGACAAGTACTGGTATCTTTAGACCAGCTACCGGAAGTATTGGTTTCTCTGCAAGTGGTGTTGAAAGATTACGGGTTTCACCTACACAATTAATTTTATATCCAAGTACTGGTACTGCTGCTGCACCAAATATTCTATTTTCTGCTACTGGTAATACTGCATTAGGTATAAATGTAACTGGAAATAAAATAGATTTTGTATCAAATAGTGCAGTTAATGTAAGTCTATCACAGGGTTTAAGTACTTTTAATGGTAACGTAGTAGTTACTGGAAATCATACCGTTAATGGAAATACTACATTAGGTAACGATGCCTCTGCATCTGGTGATAAAGTTGTTGTCAATTCTCAAAGTAGATTTAATGGAATTTCAACATTTGCTGCTGATGCATATCTACAAAATTCAGCGAATTTACTAATATTCACTGGTTCAACTATTAGATTTAATTCAGCGAATTCACCAACAACCATAGATGAAACCAATGGTTTAACATTTAGTCAAACTGGAAGTACTGGTAATTATAATTTCATATTATATAATGGTGCATCACCACAAGTTGTTGCTAAAATGACAAGAAATGGTTTTGCATTACCTGTTATGAATCCAATTGATGATTCTAAAGGTGAAGATGGGATGATTGCTTACAGTACTCAACGCAATACTGTAATCCAAAAATCAAATGGAACATGGACGACTGTTGGTTCCGGTGGTGGAGTTATTACAACATTTACTACAGCTAATTGGGTATTAAATGGTTCTTACTATACATTTACTATTACTAATGCCAATATACAACAAGTTTCTGTGCAAGAATTAAGTGGGGTGAATTATAGTCCTGTTGAAGTTGATAGTGTGGTTATTTCACCTACCAACGCAGTACTATCAGTACCTGCATCGCCAGATTTACGATTTAATGGTCGGGTAATTGTACAATATCAATAA

Genome Context

Tertiary structure

QXO12467.1
ESMFold structure
Source ESMFold
pLDDT 54.0
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_49 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank