Protein

View in Explore
Genbank accession
YP_011712309.1 [GenBank]
Protein name
putative pore-forming tail tip protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
Seq2Symm
C1 confidence 0,972 truncated
C1 0,972
C3 0,097
C2 0,011
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MTDKLIRELLIDVKQKGATRTAKSIENVSDALENAAAASELTNEQLGKMPKTLYSIERAADRAAKSLTKMQASRGMMGITKSIDSIGAKLDDLAIAMIEVSDKLESGFTHVGKSVKAMGNDVAAATEKVQDRLYDTNRVLSGTTRGFNDTTTSAGRASRALGNTSGSARGATRDFAAMAKVGGSLPLMYAAIASNVFVLQSAFEQLKMGDQLNRLEKFGTIVGTQTGTPVQTLARSLQEAAGYAISFEEAMRQASSASAYGFDAEQLNKFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYADYVKQLNAANTGITYNVNSLSTFQKQQAYANAVIAESTKRFGYLDDVLRATPWEQFAANADAALRKVQQAAAKYLGPVIDSINAVFYTSQASISASAARAQEETNRQIDPTNVGAVALSLSASEEGYNKALDMYKESLDKRNKLKTEFDKRMSQADASTAAAIRLVGEGMPVGLAAGGFEVGGVRIGSSEANKKFVEETAAMGLQVARLGKEVDDSTENLNAWKSAYQAAGAAAAKTNPEFQKQINLQKDMNDPDAVYDFNSATLKGLTEQQKAYDQAKKTASDLANDIQNIAQNTNTAAKTSASLSDTIKTIESLSAGTGKNADEYVKSLNLGYNTLSEMKTASQALAGYVKLTSNETKNQLEVQQKIAEVYNQTKDKEKAQEAGRRLEIQQLEEQEAALKRVLETNKGNKAIENEIAKVQLERIKITNQDMEAQKKVKDYTDKILGVDREIALLNNRTMTDTQYRLAQLKLELTIEKEKYAWYSRQAGKQKEAEQSRRAQAQINRELVEAEKQATATHVSALMDALEVSQTERNVTGQSQILTERLSISEKQLELSKDNTEEEIKYRNEIYKTSAALEQLKKQRDAQMQQQVGSSVGATYTPTTGLSGDDKKYADMQNQMASYDEAISKLGALNSQATEVGQSIGNLTNAMMQFSQGSLDTVSTVAAGMQMVSSMIAMGVSNQVSAIDQAIAAEQKRDGKSEASKAKLKKLEAEKVKIQQDAAKKQIIIQTAVAVMQAATAVPYPWSIPLMIAAGVAGALSLAQASSASGMSSIGDSGTDTAQYLSLGERQKNVDVSMSANAGELSYIRGDQGIGNANSFVPRAEGGNMYPGVSYQMGEHGTEVITPMVPMKATPTDELKGSSKSTSGRPIVLNISTMDAASFRDFASSNSAAFRDAVEQALNENGTTLKSLGNS
Physico‐chemical
properties
protein length:1235 AA
molecular weight: 132869,68790 Da
isoelectric point:5,76213
aromaticity:0,05020
hydropathy:-0,42842

Domains

View on InterPro
Domain architecture
YP_011712309.1
1 1235 aa
TAS 1–81 · TAS 1198–1233 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Salmonella phage phagemcphageface [NCBI] · taxon 2713311
Uroviricota Caudoviricetes Demerecviridae Epseptimavirus Epseptimavirus phagemcphageface
Host
Salmonella enteritidis [NCBI] · taxon 149539
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_011712309.1 [NCBI]
Genbank nucleotide accession
NC_102109 [NCBI]
CDS location
range 20365 -> 24072
strand +
CDS
ATGACTGATAAGCTAATACGAGAACTACTTATAGATGTAAAGCAGAAAGGGGCAACCCGTACTGCAAAATCTATTGAGAACGTTTCCGATGCGTTAGAAAATGCTGCTGCCGCTTCCGAACTGACTAATGAGCAGCTAGGAAAAATGCCCAAAACTCTTTACTCCATTGAGAGGGCAGCGGATAGAGCAGCTAAAAGCCTAACTAAAATGCAGGCTAGCAGAGGTATGATGGGTATCACCAAATCTATAGATAGTATTGGTGCTAAGTTAGATGACCTTGCTATTGCTATGATTGAGGTATCCGATAAGCTAGAGTCTGGATTTACACATGTTGGTAAATCTGTTAAGGCGATGGGTAACGATGTAGCTGCTGCAACTGAAAAAGTTCAAGATAGATTATACGATACAAACCGTGTTTTGTCGGGTACTACTAGAGGCTTCAATGATACTACCACATCCGCAGGTCGTGCTAGTCGTGCTCTAGGTAATACATCTGGTTCTGCACGTGGTGCTACTCGTGACTTCGCAGCAATGGCTAAAGTTGGTGGTTCTCTACCTCTTATGTATGCTGCTATCGCATCTAACGTGTTCGTTCTACAATCTGCATTCGAACAACTTAAGATGGGTGACCAGTTAAACCGTCTGGAGAAGTTCGGTACTATTGTAGGTACTCAAACAGGTACTCCGGTACAAACTCTAGCTAGATCTCTACAAGAGGCTGCTGGTTATGCAATCTCCTTCGAAGAAGCAATGAGACAGGCATCCTCTGCTTCTGCATATGGATTCGATGCTGAACAACTTAATAAATTTGGTCTAGTAGCTCGTCGTGCTGCTGCTGTTCTTGGTGTTGATATGACTGATGCACTTAACCGTGTAATCAAAGGTGTATCTAAACAAGAAATCGAACTTCTGGACGAACTTGGTGTTACTATTCGTCTTAATGATGCTTACGCTGACTACGTTAAACAGTTAAATGCTGCTAACACAGGTATCACATATAACGTCAATAGTCTTTCCACTTTCCAAAAGCAACAAGCATATGCTAACGCAGTAATTGCTGAATCTACTAAACGTTTCGGCTACTTGGATGACGTACTCCGTGCAACTCCATGGGAACAGTTTGCTGCTAACGCTGATGCTGCACTAAGAAAGGTTCAACAGGCTGCTGCTAAGTATTTAGGGCCGGTAATTGATTCTATTAACGCAGTATTCTATACTTCTCAAGCATCTATCTCGGCTTCTGCTGCTAGAGCACAAGAAGAAACTAACCGTCAGATTGACCCAACTAACGTTGGTGCTGTAGCTTTAAGTCTTTCCGCTTCCGAGGAAGGATATAATAAAGCTCTTGATATGTATAAAGAGTCTCTGGATAAGCGTAATAAACTAAAGACTGAGTTTGATAAACGTATGTCCCAAGCAGATGCTAGTACTGCTGCCGCTATTAGATTAGTGGGTGAGGGGATGCCTGTTGGATTAGCTGCTGGGGGATTTGAAGTAGGGGGAGTGCGCATAGGTTCTTCCGAAGCTAACAAAAAGTTTGTAGAAGAAACCGCAGCTATGGGACTACAGGTAGCAAGGTTAGGTAAAGAAGTTGATGACTCTACTGAAAACCTTAATGCTTGGAAATCTGCGTATCAAGCTGCTGGTGCTGCGGCTGCTAAGACTAATCCAGAATTTCAGAAGCAGATTAATCTGCAGAAGGATATGAATGACCCTGATGCGGTTTATGACTTTAACTCCGCAACTCTGAAAGGACTGACGGAACAGCAGAAAGCATATGATCAGGCTAAGAAAACTGCTAGTGATTTAGCTAACGATATACAGAACATCGCTCAGAATACTAATACTGCGGCTAAAACTAGTGCATCCCTATCAGATACGATTAAGACTATTGAGTCTCTATCTGCTGGTACTGGTAAAAATGCTGATGAGTATGTTAAGAGTCTGAACTTAGGGTATAATACTCTTAGTGAGATGAAGACTGCCTCACAAGCTCTTGCTGGTTATGTAAAATTAACTAGTAATGAGACTAAAAATCAGTTAGAAGTTCAGCAAAAGATTGCCGAAGTGTACAACCAGACCAAGGATAAAGAGAAAGCACAGGAAGCGGGTAGACGTCTAGAAATCCAACAGTTAGAAGAACAGGAAGCAGCCCTTAAGCGTGTCCTAGAAACTAACAAGGGTAACAAGGCAATTGAGAATGAAATAGCTAAGGTTCAGTTAGAACGTATCAAAATTACTAACCAGGACATGGAAGCTCAGAAGAAAGTTAAGGACTATACGGATAAGATTCTTGGTGTTGATCGTGAAATTGCTCTCCTGAATAACCGTACTATGACAGATACCCAGTATCGTTTAGCACAGTTAAAACTAGAACTGACTATTGAGAAAGAAAAGTATGCGTGGTACTCTAGACAAGCTGGTAAACAGAAAGAGGCTGAACAATCTAGGCGTGCTCAAGCACAGATAAATAGAGAACTCGTGGAAGCAGAGAAACAAGCTACCGCTACTCATGTATCAGCTCTCATGGATGCCTTAGAGGTTAGTCAAACTGAGAGAAATGTCACTGGCCAGTCTCAGATTCTTACTGAAAGGTTATCGATTTCAGAAAAGCAGTTAGAGTTATCCAAAGACAATACTGAAGAAGAAATTAAATATCGTAATGAGATTTATAAAACTTCAGCAGCCCTAGAACAGCTTAAAAAACAGAGAGATGCTCAGATGCAGCAACAGGTAGGTTCTTCTGTTGGAGCTACTTATACTCCTACGACTGGTTTATCCGGGGATGATAAGAAGTATGCTGATATGCAGAACCAGATGGCCTCTTACGACGAAGCTATTTCTAAGCTTGGAGCATTAAATAGCCAAGCAACGGAAGTTGGCCAGAGTATAGGCAATCTTACTAATGCCATGATGCAGTTCTCTCAGGGATCTTTAGATACTGTTAGCACTGTGGCAGCGGGTATGCAGATGGTTTCTTCAATGATCGCTATGGGAGTAAGTAATCAAGTATCCGCTATTGATCAGGCTATTGCAGCAGAGCAAAAACGTGACGGTAAATCCGAAGCATCTAAAGCTAAGCTCAAGAAACTGGAAGCGGAAAAGGTTAAGATCCAGCAGGATGCAGCTAAGAAGCAAATCATTATTCAGACGGCAGTAGCGGTGATGCAAGCAGCAACAGCTGTTCCCTACCCCTGGTCTATTCCTCTTATGATTGCCGCAGGTGTTGCAGGTGCATTGTCTCTTGCACAAGCATCCTCTGCATCTGGTATGTCTTCTATTGGAGACTCGGGTACTGATACAGCTCAATACTTGTCTCTTGGAGAGCGCCAGAAGAACGTGGACGTTTCTATGTCGGCTAACGCAGGAGAACTTTCTTATATTAGAGGAGATCAAGGGATTGGTAATGCGAACTCTTTCGTACCTCGTGCAGAAGGTGGTAATATGTACCCTGGAGTTAGTTACCAGATGGGTGAGCATGGTACCGAAGTAATCACTCCTATGGTTCCGATGAAGGCTACTCCTACTGATGAACTCAAAGGATCTTCAAAGAGTACATCGGGTAGACCTATTGTGCTGAACATCAGTACGATGGATGCGGCTAGCTTCCGAGACTTTGCTTCGAGTAACAGTGCTGCTTTCAGGGATGCCGTGGAACAGGCTCTTAATGAGAATGGAACCACCCTGAAATCACTTGGTAATTCTTAA

Genome Context

Tertiary structure

YP_011712309.1
ESMFold structure
Source ESMFold
pLDDT 65.0
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 36147828 GenBank