Phage RBP Database

Genbank accession

QAX96801.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,80

Protein sequence

MSSKLIFTMQYFRGEKKREYLADPETGLIPGTGETGGGLEEYDRAKAWDKDDVVIRDGAIFQANEDIPAGSSFIEGLTGPTWLKLGAEAVATLPDYAVGIRYLKDQAIARGRVIYRAKNDFTSAAWNPAQWETVFSEDAVRDKVADFSTAQSYVTHELVAYNGDIYAANEDMAAGAFDASKWQNLTTPNVTYVDDYAPGTVYTKDAVVMRNGQLFRATQQTATAWDEGDWQAVSSVSTVRGYWDLNATYKANEIVIANDRFYRANGDIGSGTTFTVGTGTEEWTEVSGPVTPPITADDFKASTLYAKNQVIVVNGILYRAKAEFTSLSAFSIADWDPVSYDPETAVDAWQANTDYKAGQLATLVVNGRNTLYRARADITGGASFVAAEWDDLTQTSTWRAEWDISNIYAKDDVVWRAGHLYIANDAVPINTAWVEGITGATWARLLAEPVSKISVWAATTSYQKDELLAYDGNIYRVEAPFVSGAAFTSGGLELLTAGKYTKIPAFRGSNAYVQDETIAEGGILYRAKADFTSATNFNEADWEVIADIATNILYDFSITEDYVENEIVFHLDSIWRAKGDLAPGAWDESDWEFVSEYSTFKGQHVQARDYKQDDVVIHNNRLYRANSNIAGGTAFLAGSGGNQWTEVSPPGNPSAPDWASSTAYVQHNLVIHGGVLYRCKTDHTSGSSFLASQWETLKAEAATLASTYQNGQEYVLDQLIEYNGILYRCIEAMLSSPVTFEPDKWQGVSVSYIRISAHSASAVYREGELIWHVNRLYRAKAGINPGRAFSLNDWAISEDTNYVSEYAENEDYRLGQLIRSGVDLYIANEAITGAPAVLDETKWNRVGYRPTVQGAHDDTLAYKQGDIVLKEGTWYEANADIAANVALSEGTTGATWKRVTDSMTIKAHAADAIFFPGQLCLHEERVYTAKEFLTVDSSNTFQSIKWEKLGSFVTLAEDYQDNIEYKKDQIIFHLSVLYRRIATGTDTTWTAANWQALSLTAAILNDFDNTKNYAANEVITRGGATYRVKTPGIKASFVESDWDRIDERPTFRGEWAQANAYKAADFVVRDSILYTANDDVPATTAFSVGTTGATWKRQSPENIAVEHVGAEITVTEGQPVLHRRVLYFATQTVTIPDAFDETGLKKIGRFGMTEQTFEADTWFPAGWLMRQDDKVYKAKTDFTTATAFDVADWDLVSHDYAFIVEFSTADTYYKDQIVINSKLLYRANTDVTVAGAWDSAQWDQLAPAEAARIETHDETNEYLLDDIVFKDGMLWRANSAIAANTPFVKGTSANEWRAAIELKIKAFAEGENILTGEYRLIEGHLAVAKEDIASTAAYATETEKWSILSHDISKLKMVYPVREYLPAETNINYDGSIDGSVSDTWVVTGSLPTTELSVLLWLGYEFHLGGLDVTDKVVQKGSSAPYGFGISGVWIESGDVLEVR

Physico‐chemical properties

protein length:	1444 AA
molecular weight:	159850,15480 Da
isoelectric point:	4,63507
aromaticity:	0,11911
hydropathy:	-0,28767

Domain architecture

QAX96801.1

1 1444 aa

STR 145–234 · STR 242–341 · CBM 346–392 · STR 399–490 · STR 603–698 · STR 705–795 · STR 804–899 · STR 957–1045 · CBM 1052–1098 · STR 1204–1299 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:2.10.10.90
STR

G3DSA:2.10.10.90 G3DSA:2.10.10.90 IPR003610 IPR003610 IPR003610 IPR003610 IPR003610 IPR003610 G3DSA:2.10.10.90 G3DSA:2.10.10.90 IPR003610 G3DSA:2.10.10.90

IPR003610
CBM

IPR003610 IPR003610 G3DSA:2.10.10.90 G3DSA:2.10.10.90 G3DSA:2.10.10.90 IPR003610

QAX96801.1

11444 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1986
ATT

DC_1986 DC_1986 DC_1986 DC_1986 DC_1986 DC_1986 DC_1986 DC_1986

DC_1986
ATT

DC_1986 DC_1986 DC_1986 DC_1986 DC_1986

QAX96801.1

11444 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	145	234	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
IPR003610	CBM	DC_0028	193	233	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	242	341	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
IPR003610	CBM	DC_0028	296	338	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
IPR003610	CBM	DC_0028	346	392	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
IPR003610	CBM	DC_0028	399	445	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	405	490	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
IPR003610	CBM	DC_0028	453	490	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
IPR003610	CBM	DC_0028	597	647	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	603	698	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
IPR003610	CBM	DC_0028	655	697	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
IPR003610	CBM	DC_0028	705	748	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	706	795	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	804	897	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
IPR003610	CBM	DC_0028	853	899	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	957	1045	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
IPR003610	CBM	DC_0028	1052	1098	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	1204	1299	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QAX96801.1

1 1444 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	1322	1322	0,8778
Central domain	1323	1433	112	0,5402
C-terminal	1434	1444	10	0,0500

Note: Constraints were applied during segmentation.
Fixed 57 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Vibrio phage vB_VmeM-Yong MS31 [NCBI] · taxon 2500764

No lineage information

Host

Vibrio mediterranei [NCBI] · taxon 689

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

QAX96801.1 [NCBI]

Genbank nucleotide accession

MK308676.1 [NCBI]

CDS location

range 179218 -> 183552
strand +

CDS

ATGAGTAGCAAATTAATCTTTACCATGCAATATTTCCGCGGGGAGAAAAAGCGCGAATATCTCGCTGACCCTGAAACCGGACTTATTCCTGGTACTGGTGAAACGGGCGGAGGTCTAGAAGAATACGACCGCGCCAAAGCATGGGATAAAGACGACGTCGTTATTCGCGACGGCGCTATCTTCCAAGCGAACGAAGACATTCCTGCGGGCTCTTCTTTCATTGAAGGCCTTACTGGCCCGACTTGGCTTAAGTTAGGCGCAGAAGCGGTAGCGACACTTCCCGACTACGCTGTAGGCATTCGTTATCTTAAAGACCAAGCGATTGCCCGTGGTCGAGTTATCTACCGTGCGAAGAATGACTTTACTTCTGCCGCGTGGAATCCAGCACAATGGGAAACGGTCTTCTCTGAAGACGCAGTTCGCGATAAGGTAGCGGACTTCAGTACTGCACAGTCTTACGTAACGCATGAATTAGTTGCCTACAACGGTGACATCTATGCGGCAAACGAAGATATGGCGGCAGGGGCCTTTGACGCATCTAAATGGCAGAATCTAACTACGCCTAACGTAACATACGTCGATGACTATGCCCCGGGCACAGTCTATACCAAAGACGCTGTAGTTATGCGCAATGGTCAATTGTTCCGTGCAACGCAACAAACTGCGACAGCATGGGATGAAGGCGATTGGCAAGCGGTTTCTTCAGTTTCTACTGTTCGTGGTTACTGGGACCTTAATGCAACCTATAAAGCAAACGAAATAGTTATCGCTAATGACCGCTTCTATCGTGCTAACGGCGATATCGGTTCAGGCACTACGTTCACTGTAGGTACTGGTACTGAAGAATGGACTGAGGTGTCGGGCCCTGTTACTCCGCCTATCACGGCAGATGACTTTAAAGCTTCTACGCTTTATGCTAAGAATCAGGTTATTGTAGTTAACGGCATCCTTTATCGGGCTAAGGCAGAGTTCACTTCACTCTCTGCATTTAGCATCGCGGATTGGGACCCTGTCTCTTATGACCCAGAAACGGCCGTAGACGCATGGCAAGCTAATACTGACTATAAAGCAGGGCAGTTAGCCACGTTAGTTGTAAATGGTCGTAACACGCTTTACAGAGCGCGTGCGGACATCACAGGCGGAGCGAGTTTCGTAGCGGCCGAATGGGACGACCTAACTCAAACGTCGACCTGGCGTGCTGAGTGGGATATCTCGAACATCTATGCTAAGGACGACGTTGTGTGGCGTGCAGGGCATCTGTACATTGCCAACGATGCGGTACCTATCAACACTGCATGGGTAGAAGGCATCACCGGCGCTACGTGGGCTCGTTTGTTGGCCGAACCAGTATCTAAGATTTCTGTTTGGGCAGCAACAACTTCTTATCAGAAAGATGAACTTCTAGCTTATGATGGCAACATCTATCGCGTGGAAGCCCCTTTCGTTTCTGGCGCGGCATTTACAAGCGGTGGCCTAGAACTGCTCACTGCCGGTAAGTATACTAAGATTCCTGCATTCCGTGGCTCTAACGCTTACGTCCAAGACGAGACGATTGCCGAAGGCGGAATCCTTTACCGCGCTAAAGCGGACTTTACGTCAGCTACAAACTTCAATGAAGCAGACTGGGAAGTTATCGCGGACATCGCGACAAACATCCTGTACGACTTCAGTATCACAGAAGACTATGTAGAAAATGAAATCGTTTTCCACTTAGACTCCATCTGGCGTGCTAAAGGCGACCTTGCTCCTGGGGCTTGGGACGAGTCCGATTGGGAATTCGTTTCTGAATACTCAACCTTTAAAGGTCAGCACGTCCAGGCACGTGACTACAAGCAAGACGACGTGGTAATCCACAACAACCGATTATATCGAGCAAACTCGAATATTGCGGGCGGCACTGCTTTCTTGGCAGGTAGCGGAGGTAACCAATGGACTGAGGTTTCCCCTCCAGGAAATCCTTCTGCTCCGGACTGGGCAAGCTCAACGGCATATGTTCAGCACAACTTGGTCATTCACGGTGGCGTCCTTTACCGCTGTAAGACAGACCATACTTCAGGAAGTAGCTTCCTCGCTTCTCAGTGGGAGACATTGAAAGCAGAAGCGGCTACCTTGGCTTCGACTTACCAGAATGGCCAAGAATATGTCCTTGACCAACTGATTGAATACAACGGCATTCTTTACCGCTGTATCGAAGCGATGCTAAGTTCACCTGTAACGTTCGAGCCAGACAAATGGCAAGGCGTATCGGTTTCTTATATCCGCATCTCTGCGCATAGTGCTTCAGCCGTTTATCGTGAAGGCGAATTGATTTGGCACGTGAATCGCTTGTATCGTGCTAAGGCAGGCATTAACCCAGGTCGTGCTTTCTCGCTTAACGATTGGGCTATCTCTGAAGATACCAACTACGTGAGCGAATATGCGGAGAATGAAGACTACCGCCTAGGCCAACTTATCCGTTCAGGTGTTGACTTATATATCGCAAACGAAGCTATTACCGGTGCTCCTGCTGTACTTGACGAAACTAAGTGGAACCGCGTAGGTTACCGCCCAACCGTTCAAGGCGCGCATGACGATACTCTTGCGTATAAGCAAGGGGACATTGTTCTTAAGGAAGGTACTTGGTACGAAGCTAACGCGGACATCGCGGCTAACGTGGCCCTGTCTGAAGGTACTACTGGCGCCACATGGAAACGTGTAACCGACAGCATGACCATCAAGGCACATGCGGCAGACGCAATCTTCTTCCCTGGTCAGCTCTGTCTACATGAAGAGCGCGTTTACACAGCGAAGGAATTCCTAACGGTAGACAGCTCTAATACGTTCCAGTCTATCAAGTGGGAGAAGCTAGGTTCGTTTGTTACTCTAGCGGAAGACTACCAAGACAACATCGAATACAAGAAAGACCAAATCATCTTCCATCTGAGCGTTCTTTACCGCCGCATTGCGACGGGCACCGATACGACTTGGACGGCAGCAAATTGGCAAGCTCTTTCTTTAACCGCGGCGATTCTAAACGACTTCGACAACACGAAGAACTATGCTGCCAACGAGGTCATCACTCGCGGAGGTGCTACCTACCGTGTTAAGACTCCTGGCATTAAAGCTAGCTTCGTAGAAAGCGATTGGGACCGCATCGATGAGCGTCCTACGTTCCGTGGCGAATGGGCTCAGGCTAATGCTTATAAAGCAGCTGACTTCGTAGTTCGCGACAGTATCCTTTACACTGCCAACGATGATGTTCCGGCAACAACTGCATTCTCAGTCGGCACTACCGGCGCTACATGGAAACGTCAGTCGCCAGAGAACATTGCAGTTGAGCACGTAGGTGCTGAGATTACGGTAACTGAGGGACAACCTGTTCTTCATCGCCGTGTTCTTTACTTCGCAACACAGACGGTAACCATTCCTGATGCGTTCGATGAAACCGGACTTAAGAAGATTGGTCGCTTCGGCATGACCGAGCAAACCTTCGAAGCCGATACTTGGTTCCCTGCTGGTTGGTTAATGCGTCAAGACGATAAAGTCTACAAAGCGAAAACGGACTTTACCACTGCGACGGCCTTTGATGTTGCTGACTGGGATTTAGTTTCTCATGACTACGCGTTCATTGTAGAGTTCAGCACAGCTGACACTTACTACAAAGACCAAATCGTTATCAACTCTAAACTACTTTACCGTGCTAATACAGACGTTACTGTAGCGGGTGCTTGGGACTCTGCCCAATGGGACCAATTGGCTCCAGCTGAAGCAGCTCGTATCGAGACTCATGACGAGACTAACGAATACCTACTTGACGACATTGTCTTCAAAGACGGTATGTTGTGGCGTGCTAACTCTGCCATCGCAGCGAACACTCCGTTCGTTAAGGGCACGAGTGCCAACGAATGGCGTGCAGCCATTGAACTTAAGATTAAAGCGTTTGCTGAAGGTGAGAACATTCTTACCGGAGAGTACCGCTTAATCGAAGGTCACTTAGCCGTAGCAAAAGAAGACATTGCATCTACTGCTGCGTACGCTACGGAAACTGAGAAGTGGAGTATTCTGTCTCACGACATCTCCAAACTTAAGATGGTTTACCCAGTCCGCGAATACTTACCGGCCGAGACAAACATCAACTATGATGGTTCAATCGACGGTTCAGTATCCGACACTTGGGTAGTCACGGGTAGCTTACCGACTACAGAACTTTCAGTGTTACTATGGTTAGGTTACGAGTTCCACTTAGGTGGCCTAGACGTAACTGACAAAGTAGTACAGAAGGGTTCGTCAGCACCGTATGGTTTCGGCATTAGCGGTGTCTGGATTGAGTCAGGCGACGTCCTAGAGGTACGATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)