Protein

View in Explore
Genbank accession
YP_009603858.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,67
TF
Evidence Phold
Probability 1,00
Protein sequence
MSNAAGAPGADGAPGADGADGADGADGADGAPGVGVPAGGTTGQVLSKVDGTDYNTTWVTGGGGGVPAEHDHINTEVTGSLTVSGSFSSPGVGSNSLKLGVNSQSDGFRSVAVGDYSEAPALYTVAIGRGALASDNGATSIGQGANGSGQYCVAIGQAAAASANWAVAVGRAASASDIGAIAIGYGADASHRGSLAFGRDTATTRQNQIVMGSTIANYDIREVAMGLGAENYRANLYGGVTLRATDAELTDNDGADLYIRPGAPTGAGIGGTLSLQTTPSGASSDVLGTPVDRITILQDGCVGVGVTAPTDKFEVDGKIRAVDINFSGLPTSAAGLAAGDVWNDAGTLKIV
Physico‐chemical
properties
protein length:351 AA
molecular weight: 34125,77930 Da
isoelectric point:4,26198
aromaticity:0,04843
hydropathy:-0,00456

Domains

Domains [InterPro]
IPR011049
89–147
IPR011049 IPR011049
IPR011049
91–229
IPR011049
cd12820
95–213
cd12820
IPR008640
123–145
IPR008640 IPR008640
YP_009603858.1
1 351
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage RDJL Phi 2
[NCBI] 		1682380 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009603858.1 [NCBI]
Genbank nucleotide accession
NC_041958 [NCBI]
CDS location
range 36114 -> 37169
strand +
CDS
GTGAGCAATGCTGCAGGAGCACCGGGAGCTGATGGAGCGCCGGGAGCAGATGGTGCTGATGGTGCTGATGGTGCTGATGGTGCTGATGGTGCTCCTGGTGTTGGAGTGCCGGCAGGAGGAACAACTGGCCAAGTGCTGTCGAAGGTGGATGGGACAGACTACAACACAACCTGGGTAACGGGAGGCGGAGGCGGGGTTCCTGCTGAGCACGACCATATCAATACTGAGGTTACTGGGTCTCTCACAGTGTCGGGGTCCTTCTCAAGCCCAGGCGTGGGTTCAAATTCCTTGAAGTTAGGGGTAAACTCACAGTCTGACGGGTTTCGGTCTGTCGCAGTAGGAGACTATTCGGAAGCCCCTGCCCTATACACGGTGGCAATTGGCCGTGGAGCCTTAGCATCTGACAATGGTGCAACCTCCATCGGACAGGGGGCAAATGGCTCAGGGCAATACTGCGTGGCCATTGGGCAAGCCGCTGCTGCTTCTGCAAACTGGGCTGTTGCCGTCGGACGCGCTGCATCAGCTTCTGACATTGGGGCAATTGCCATTGGATATGGCGCTGATGCAAGTCACAGGGGCAGCTTGGCTTTTGGCCGAGATACTGCAACAACCCGCCAGAACCAGATTGTCATGGGCTCTACGATTGCGAACTACGATATTCGCGAAGTGGCTATGGGGCTTGGTGCTGAGAACTACCGAGCGAACCTATATGGGGGCGTTACCCTACGGGCTACAGATGCAGAGTTGACTGACAACGACGGAGCAGACCTTTACATAAGACCTGGGGCTCCAACAGGGGCCGGGATAGGAGGCACACTGAGTTTGCAGACAACTCCGTCCGGGGCCTCAAGTGACGTCCTTGGAACACCAGTCGACCGGATAACCATTCTGCAAGATGGTTGTGTGGGCGTCGGAGTGACAGCCCCGACGGATAAGTTCGAAGTGGATGGCAAAATAAGGGCTGTGGATATCAACTTCTCTGGCTTGCCGACCTCTGCGGCGGGGCTAGCTGCAGGGGACGTATGGAACGACGCCGGGACCCTGAAGATAGTTTAA

Tertiary structure

PDB ID
c80ec54b41ee03385757aba7a8ae4ec56f2121fdd67b1a0ca4d48c9a85c00021
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7575
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Roseophage RDJL phage 2, a siphovirus infects Roseobacter denitrificans OCh114 Liang,Y., Zhang,Y., Zhou,C., Chen,Z. and Yang,S. 2016-02 — GenBank