Protein

View in Explore
Genbank accession
QGF20124.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,68
Protein sequence
MPSTGKTPTLGLNKWELTDKPKMADFNKDNENIENFATEHKQKMTEVEKKSKSNEDRLDALRVGTINRLEWYNSESYTGPGNITSITDAPTKRRGFKWSGMSTGPQTLEIKTLPVEPNSDYVLAFLEDIEGSFTSYEIKLAYTNGGQQYKSIVKQGSTPQSNGYKLKTHKFSIPSGATDTKIQFVVQGATSSTSLKVLNILLARGNVVPDYNLAPEDVLKRLDLLFEKDTSLQNQVNQKAAKTDVILKVSAPIDRDCNSFKQANAFFYFDTGAGDFKNTPEGTLAHRSNRVFIVRNIGEGGWGFQQEFINLYPTNKITRYIRNYTLVNNSWSKWYRVYDEANKPTPQELGVAAVNMPMADTDLNNHKEPGFYWGYQNMVNAPVPNGVAIMEVVKYNNDCVLQRFTSVRADSNHTTYIRTCYSNKWSSWKKIYDEGNKPTPADIGAWDKTAKRLEGVDLNTITEGGIYSTVRNSIEKNAPTLADGRLIVLSWNTGHWASQMFFADGGGVFTRTATNMEGTGWTNWAEIYSKQNKPTPSDIGASPSNHNHDRRYYPIPKQAITDFNSGIAITEGQHLVSSSTAIPNSPPLYAQDGSSIYGILHVYVSVGDSYNGVNNWIWQDFHDTRGNHYWRYKINNADWSPWRAVYNSVNKPTPQAIGAVATEGDGVINGTLELRKADKLIRFATERGWILKQGGTAAETSLDLVSETDGKAFRVLEPSGKKGIYMWVSSGGTQFNVDGNSVYHQGFKPTPSDIGAASSNHNHDSAYLKKGDTAANSNKLANMGIYDSSKGTQGVPNVGNDGVMEVGHIIDFHLKGSNKDFDMRITAGDGSLDVDKALSAENLWARKYMRINDWYGGPEDGRFWYKQEGRILATENVQDFQVANKSVAKGDYWDNGDSTRVFHLGGGVRLVRQIVKTGYANSGGGVSYTIHFPKAWSWVLPISLVSHNYNDASNNTSGYCTIDHWTNSYLNGGCYQMVAGKPTQIILTYLATE
Physico‐chemical
properties
protein length:993 AA
molecular weight: 110417,67260 Da
isoelectric point:7,63424
aromaticity:0,10775
hydropathy:-0,58640

Domains

View on InterPro
Domain architecture
QGF20124.1
1 993 aa
STR 359–432 · STR 453–528 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QGF20124.1
1 993 aa
Domain Start End Length (AA) Confidence
N-terminal 1 74 74 0,9600
Central domain 75 273 200 0,4572
C-terminal 274 993 719 0,3856
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Clostridium phage CPAS-15 [NCBI] · taxon 2653659
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Clostridium perfringens [NCBI] · taxon 1502
cellular organisms Bacteria Bacillati Bacillota Clostridia Eubacteriales

Coding sequence (CDS)

Genbank protein accession
QGF20124.1 [NCBI]
Genbank nucleotide accession
MN417334 [NCBI]
CDS location
range 46152 -> 49133
strand +
CDS
ATGCCAAGTACTGGTAAAACTCCTACTCTAGGTTTAAATAAGTGGGAGTTAACAGATAAGCCAAAAATGGCTGATTTTAATAAGGATAATGAAAACATTGAGAACTTTGCTACCGAACATAAACAGAAAATGACTGAGGTAGAAAAGAAGTCTAAATCTAATGAGGATAGGCTAGATGCTTTAAGGGTTGGTACCATTAACAGGCTTGAGTGGTACAACTCTGAGTCTTATACTGGTCCTGGTAATATCACATCTATTACAGATGCTCCAACCAAGAGACGAGGTTTTAAATGGTCTGGTATGTCAACAGGTCCACAAACTCTTGAAATTAAAACTCTGCCTGTAGAACCAAATAGTGATTACGTATTAGCCTTTCTAGAAGATATTGAAGGTAGTTTTACTAGCTATGAAATTAAACTGGCTTACACTAATGGGGGTCAACAATATAAGAGTATTGTAAAACAAGGTAGTACACCACAGAGTAATGGGTACAAGTTAAAAACTCATAAATTTAGTATTCCCTCTGGAGCTACTGATACCAAAATACAATTTGTGGTACAGGGTGCAACCTCAAGTACCTCATTAAAGGTACTAAATATCTTATTAGCTAGAGGTAATGTGGTACCTGACTATAACCTAGCCCCTGAGGATGTGCTAAAAAGATTAGACCTATTATTTGAGAAAGACACTAGTTTACAAAATCAAGTAAACCAAAAAGCTGCTAAAACCGATGTAATTCTAAAGGTTAGTGCTCCTATAGATAGAGATTGTAATTCATTTAAACAAGCGAATGCCTTCTTCTATTTTGATACAGGAGCTGGTGACTTTAAAAATACCCCAGAGGGAACCTTAGCCCATAGGAGTAATAGAGTTTTTATAGTTAGAAATATTGGTGAGGGGGGATGGGGATTCCAACAGGAGTTTATTAATCTATACCCAACCAATAAGATAACCAGATATATTAGAAACTACACATTAGTAAATAATTCTTGGAGTAAGTGGTATAGGGTTTATGATGAGGCTAATAAGCCAACACCCCAAGAATTAGGTGTAGCTGCGGTTAATATGCCCATGGCTGATACAGACCTGAATAATCATAAGGAACCTGGTTTCTATTGGGGTTATCAAAATATGGTCAATGCCCCTGTACCCAATGGTGTAGCAATTATGGAGGTAGTTAAGTATAATAATGATTGTGTATTACAAAGATTTACCTCAGTTAGAGCAGATAGTAACCATACTACTTATATTAGAACCTGCTATTCAAATAAATGGTCTAGCTGGAAGAAGATTTATGATGAGGGTAATAAGCCTACCCCAGCAGATATAGGGGCTTGGGATAAAACAGCCAAAAGACTAGAAGGTGTAGATCTAAACACCATTACAGAGGGAGGTATTTATTCTACAGTTAGAAATTCTATTGAAAAAAATGCCCCAACTCTAGCAGATGGGAGATTGATTGTTTTATCCTGGAATACAGGACACTGGGCTTCTCAAATGTTCTTTGCAGATGGTGGAGGAGTTTTTACTAGAACAGCTACAAACATGGAGGGTACTGGATGGACGAATTGGGCTGAAATATATAGTAAACAAAACAAACCTACACCTTCTGATATAGGGGCTTCCCCTTCTAATCATAACCATGATAGGAGGTACTATCCTATACCTAAACAGGCTATTACTGATTTTAATTCTGGTATAGCTATAACTGAGGGTCAACATCTGGTATCCTCTAGTACAGCTATACCTAATTCACCTCCTCTATATGCTCAAGATGGCAGTAGCATATATGGAATACTTCATGTATACGTTAGTGTTGGTGACTCTTACAATGGTGTGAATAACTGGATATGGCAAGACTTTCATGATACTAGGGGTAATCACTACTGGAGGTATAAAATTAATAATGCTGACTGGAGTCCTTGGAGAGCTGTATATAATTCTGTTAATAAACCAACCCCCCAGGCTATAGGGGCTGTAGCTACTGAAGGTGATGGAGTAATAAATGGAACTCTAGAACTTAGAAAAGCCGATAAGCTAATAAGGTTTGCTACTGAGAGAGGCTGGATTTTAAAACAGGGAGGAACTGCAGCAGAAACCTCCTTGGATCTAGTTTCTGAAACTGATGGAAAGGCCTTTAGGGTATTAGAACCTTCTGGAAAAAAGGGCATCTATATGTGGGTATCATCAGGGGGAACACAATTTAATGTAGATGGCAATTCTGTGTACCATCAAGGATTTAAACCTACTCCATCTGATATTGGAGCAGCCTCTTCTAACCATAACCATGATAGTGCTTATTTGAAGAAAGGAGATACAGCTGCCAACAGTAACAAGCTAGCTAATATGGGTATATATGACTCTAGTAAAGGAACTCAAGGGGTACCTAATGTCGGTAATGATGGGGTTATGGAAGTAGGGCATATTATAGACTTCCACCTAAAAGGCAGTAATAAAGATTTTGATATGAGGATAACCGCTGGAGATGGATCCCTAGATGTGGATAAGGCTCTATCAGCTGAAAACCTATGGGCTAGAAAATATATGAGAATAAATGACTGGTATGGTGGTCCAGAAGACGGAAGATTTTGGTATAAACAGGAGGGTAGAATACTAGCCACTGAGAATGTTCAAGACTTCCAGGTAGCTAATAAATCTGTAGCTAAAGGAGACTATTGGGATAATGGAGACAGTACTAGGGTATTCCACTTGGGTGGAGGTGTAAGGTTAGTTCGTCAAATAGTTAAGACAGGCTATGCTAACTCAGGTGGGGGTGTAAGCTATACTATACATTTCCCTAAGGCTTGGAGTTGGGTATTACCAATATCTCTAGTATCACATAACTATAATGACGCTTCCAATAATACCTCTGGTTATTGTACTATTGACCATTGGACTAACTCATACCTAAATGGTGGATGTTATCAAATGGTAGCTGGTAAACCAACTCAAATAATACTAACCTACTTAGCTACTGAGTAA

Genome Context

Tertiary structure

QGF20124.1
ESMFold structure
Source ESMFold
pLDDT 67.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Characterization and Food Application of a Bacteriophage-Derived Endolysin and Its Cell-wall Binding Domain for Biocontrol and Rapid Detection of Clostridium perfringens Cho,J.-H., Kwon,J.-G., Kong,M., Ryu,S. and Lee,J.-H. 2021-05 — GenBank