Protein

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Genbank accession
QGZ14453.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKVISGGIPGVPQHTTKVGDVYAQLHRIAFARGEQLNETERLTKALGNEITDTLNVNYESLNLKLSEHMAKEGPQHGEDLKTLGLSMVGDFPLTHAQHILEGGVYNEYVTPRALSDALHQTIHTPTPELMSVGRTHFCMVDLAPELSGWTRATGESGGTQQWERGGSIYHLDGHAYVGFPIRGKSTSMLVDETPGAKQIHGLRQVGVRSGAGTGDVLGWNAIALREYRASHPLTFLGTNGFAYDALYAPIGHDLSNTQLTANHVTWLDTDNVNNHFGGTISANSNGVRFGLIHCEKAVSGFHNGINGGSFFGWGSNVITDSSVFQYTFEGQQSTDSLIDIDWETLTGKTGIVFDHESEVHGGFEWIEYNRDLFIFLSANLTDADGNKYTAFFGWIANVRDPSSVTITRLRTPFDWSDSATPQLNVTHPFHPYHGSGAMRPRGGHASVYTYNLKCMVRDHVHEIRSLKELFDRCKEIPSIPVSTNLKLHFGTSPSVLGSSQGRFFLQNDHTLINGQFKANGEWDFYRQEFQDGMLDDGGFGGLSWNTSTSSRLISELEDFNQECVNTIADDGTITLTGMVWSTDNLHRARGTIRGVVGKGMLSKPVHLTDESLTAIEKEHQSYLIANDHDAYACVMVYPVGDLYEGLGMRCDSQGNVEVVKYDVAKSGERFQVTRKGDYQNVYQSEGPVTGAPDNLRRFLKRDFFVYLVNGETPKVTIKHPLMDRTLILRLDIGETITVEETLAPEPNEVGLTLFYFPFPTIHGVFMPVLGGLDGFYRLGDKSMTGGNVVYSDDVYANDSDRVVIKGRPYSIPPGFKWLDPYGKEISFNIKDGELNPETSDNVIDSNLSYPN
Physico‐chemical
properties
protein length:851 AA
molecular weight: 94140,00320 Da
isoelectric point:5,40149
aromaticity:0,09988
hydropathy:-0,35546

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGZ14453.1
1 851
Domain Start End Length (AA) Confidence
N-terminal 1 766 766 0,1623
Central domain 767 840 75 0,2709
C-terminal 841 851 10 0,7899
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-766
Central
767-840
C-terminal
841-851

Taxonomy

  Name Taxonomy ID Lineage
Phage Photobacterium phage PDCC-1
[NCBI] 		2664246 Uroviricota > Caudoviricetes > Chimalliviridae > Aphroditevirus > Aphroditevirus PDCC1
Host Photobacterium damselae subsp. damselae
[NCBI] 		85581 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Photobacterium > Photobacterium damselae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ14453.1 [NCBI]
Genbank nucleotide accession
MN562221 [NCBI]
CDS location
range 96135 -> 98690
strand +
CDS
ATGAAAGTAATAAGTGGAGGTATTCCTGGAGTACCGCAACACACGACTAAAGTTGGGGACGTTTATGCACAACTGCATCGTATTGCCTTTGCTCGCGGTGAACAACTCAACGAAACCGAACGTCTAACCAAAGCTCTTGGTAACGAGATCACTGACACTCTTAATGTTAATTACGAGTCACTTAATCTTAAGTTATCCGAACATATGGCTAAAGAAGGTCCTCAACACGGTGAGGACTTAAAGACGTTAGGCTTAAGCATGGTCGGGGATTTCCCTCTAACCCACGCACAACATATCCTGGAAGGTGGGGTTTACAACGAGTATGTTACTCCCCGTGCGTTAAGTGATGCGTTACATCAAACTATCCACACACCTACACCAGAACTCATGTCTGTCGGACGTACTCATTTTTGTATGGTCGACTTGGCACCGGAGTTGAGCGGATGGACTCGTGCCACCGGAGAGAGTGGGGGAACACAACAGTGGGAACGAGGTGGGTCGATTTATCACTTAGATGGACATGCGTACGTAGGCTTCCCAATTCGTGGTAAGTCCACTTCTATGCTAGTAGACGAAACCCCGGGTGCTAAACAAATCCATGGGTTGCGTCAAGTCGGCGTACGATCTGGTGCTGGAACGGGTGATGTGTTAGGCTGGAACGCAATTGCTTTAAGGGAATATCGTGCCTCCCACCCCCTTACGTTCTTGGGAACAAACGGGTTTGCCTACGACGCTCTCTACGCCCCAATTGGGCATGATCTGTCTAACACCCAACTTACTGCCAATCACGTGACCTGGCTTGACACAGACAACGTGAACAACCATTTTGGTGGAACCATCTCCGCTAATTCAAACGGAGTTCGTTTCGGTCTCATTCATTGTGAGAAAGCCGTCTCTGGTTTCCACAACGGGATTAACGGTGGTTCGTTCTTTGGTTGGGGTAGTAACGTTATTACTGATAGTTCTGTCTTCCAATACACTTTCGAAGGTCAGCAATCTACTGATTCGTTGATTGACATAGATTGGGAAACATTGACAGGTAAAACTGGAATTGTCTTCGATCATGAAAGTGAGGTTCATGGTGGGTTTGAGTGGATCGAGTACAATCGAGATTTGTTTATTTTCTTGAGTGCGAATTTAACGGATGCCGATGGAAATAAATACACAGCGTTCTTTGGTTGGATTGCGAATGTAAGAGATCCGTCGTCAGTGACGATCACAAGACTACGTACCCCGTTTGATTGGAGCGACTCAGCTACCCCTCAATTGAACGTCACGCATCCTTTCCACCCTTACCATGGATCGGGCGCAATGCGTCCCCGTGGTGGTCATGCTTCGGTTTACACTTACAACCTCAAATGCATGGTTCGAGATCATGTTCATGAAATCCGTAGTTTAAAGGAACTCTTTGATCGTTGTAAAGAAATTCCTTCTATCCCTGTTAGTACGAATTTAAAGTTACACTTCGGCACGTCTCCGTCTGTACTAGGAAGTAGTCAAGGTCGTTTCTTCCTCCAGAACGACCACACGCTGATCAACGGACAATTCAAGGCTAACGGTGAATGGGATTTCTATCGACAAGAATTCCAAGACGGAATGCTAGATGACGGTGGGTTTGGTGGACTCTCTTGGAACACTAGTACTTCTAGTCGACTGATTTCTGAACTAGAGGACTTTAACCAAGAATGTGTTAACACCATTGCTGATGATGGAACGATCACCTTAACCGGAATGGTTTGGTCTACTGACAACCTGCACCGTGCCAGAGGAACTATTCGAGGTGTTGTTGGTAAAGGGATGTTATCTAAACCTGTACACTTAACCGACGAGTCGTTGACTGCTATTGAGAAAGAGCACCAATCTTACTTAATAGCTAACGATCACGATGCATATGCGTGTGTCATGGTTTATCCTGTTGGGGACTTATACGAAGGCTTAGGTATGCGTTGTGATTCACAAGGCAATGTGGAAGTGGTTAAGTATGACGTAGCTAAGTCCGGGGAACGTTTCCAAGTTACTCGAAAAGGGGATTACCAAAACGTCTACCAAAGTGAAGGTCCTGTAACAGGCGCGCCTGATAACTTACGTCGTTTCCTCAAGCGCGACTTTTTCGTCTACCTGGTGAATGGTGAAACACCTAAGGTCACTATCAAGCATCCTTTGATGGATCGAACTCTGATTCTGAGATTGGATATTGGTGAAACCATTACCGTGGAAGAGACCTTGGCACCGGAACCTAATGAAGTCGGACTCACGTTGTTCTACTTCCCATTCCCAACTATTCATGGTGTCTTCATGCCGGTATTAGGTGGTCTAGATGGTTTCTATCGTTTAGGCGATAAGAGTATGACTGGTGGTAATGTTGTTTACAGTGACGACGTTTACGCGAACGACAGTGACCGTGTCGTTATCAAAGGACGTCCTTACTCTATCCCACCTGGTTTCAAGTGGCTAGATCCGTACGGTAAAGAAATCAGTTTCAACATAAAAGACGGGGAACTCAACCCAGAGACCTCGGATAATGTGATTGATTCTAATTTGTCTTACCCGAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3f0acb5dc13895b8d7c64736c7514dace00885c186b064fcbf6f6b79cedcd405
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3025
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Draft genome sequence of Photobacterium phage PDCC-1 Quiroz-Guzman,E. 2021-10-07 — GenBank