Phage RBP Database

Genbank accession

AKY02257.1 [GenBank]

Protein name

tail protein

RBP type

TF

Evidence RBPdetect

Probability 0,50

TF

Evidence RBPdetect2

Probability 0,93

Protein sequence

MIENTLPRKLYIGTIVPGYTKLYIPHSTYEDEDIVGKAFWINGTRFIDTNIDVFYTIVDGLTPDTEYKDIQGSYYDALVDTELLDNKLGINLSDTALAKTLTYPTITNVEVSAQEVDIGVGDPLVTMDIGGDAQTVRIDKKLSSEDDTHWVPAYSGAPDAVSFTSGQGTYDFRVVGSVFLPDGVTKEESPYXIIRNIKVENMFRPPSAPENIDFKVAKIMDGIERYDLQVSWDWNKGTGSSVREFVLYFVESSEYNKTQWSKASKINSGAAKAAVITSFPFNKEYKFKIAAIAWGPADQALTDSVGASFKITNNTPLDSSFTNETGIEVTYDHIKAYRDIAGSKEQTFRLDAKTGSLAIGKLDQQGHAPISVDPVNGNVNVDGXVISKTMYSASFVLSNLSGKDNPEIRTASKTGYGQAAQGMWMGYSNNDHKFRFDLGDSTRFIRWDGEKLLISGKVQIGTPGGNVDIGEGIQGNFVANIYTDAATQPSAPTGTDYPPAGWKDTPITNPQDLVWISTAVIDSKTNKVASNSAWSTPIQFTAKAGEDGVASVLIYKASTVQPTTPTNKSIPPAGWLLQAPPRAVGESIWVSSAVRKGSEPNITGNWSAPAKFSGDQGDQGIPGQNGKDGETFYTWIKYADTISGAGMSNSPTGKRYIGIASNMPSSTESNNPADYTWALMRGDQGIPGTNGKDGSTYYTWIKYADDSAGHGLTDDPTGKAYLGIATNKTVQQESSDWRDYKWSKIQGEKGDTGIPGRDGKDGKTYYTWVKYADSTQGAGMSDNPAGKKYIGIAVNQLSPTESTNPSVYTWSKFEGDQGVPGQPGADGVTHYTWIKYADTATGSGISNSPTGKEYIGFAYNKLSASESSNPSDYIWSRIKGDKGDKGDPGRDGIPGEPGKDGQTTYTWIRYADNANGSGMTNTSAGKKYIGIAVNKTTPTESNNPSDYSWSKLEGDQGVPGKPGKDGITYYTWIKYADNSSGSGMSNSPSGKKYIGFAYNKTTSTESNSPQDYVWSKFTGDDGRPGRDGEDGKDGEPGKDGEPGKDGRPGKDGKDGDDGERGPGFYAQAISNFSRFNTSSATSFFRSTFGTAPVKYDVLTQFNPSNPAAAETRQWNGSSWVSAALLVHGNMIVNGSITAKKIIASDAFLQQIGVNRIYDNAAAQSSNPESRYKMKIDLQGGSIHIR

Physico‐chemical properties

protein length:	1185 AA
molecular weight:	127630,03810 Da
isoelectric point:	5,15270
aromaticity:	0,10313
hydropathy:	-0,60330

Domain architecture

AKY02257.1

1 1185 aa

STR 10–94 · STR 100–189 · STR 205–329 · STR 345–546 · STR 1049–1164 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR057550
STR

IPR057550 IPR057551 IPR057552 IPR057549 IPR057549

IPR057550
STR

IPR057550 IPR057551 IPR036116 PTHR24637

AKY02257.1

11185 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1191
STR

DC_1191 DC_1971 DC_1971 DC_1191

DC_1971
STR

DC_1971

AKY02257.1

11185 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR057550	STR	DC_0866	10	94	InterPro cluster	Straight fiber protein PB4, first Fn3-like domain	N-terminal	Medium	Text match	229 proteins / 229 hits
IPR057550	STR	DC_0866	11	94	InterPro cluster	Straight fiber protein PB4, first Fn3-like domain	N-terminal	Medium	Text match	229 proteins / 229 hits
IPR057551	STR	DC_0197	100	189	InterPro cluster	Straight fiber protein PB4, second Fn3-like domain	N-terminal	Medium	Text match	230 proteins / 230 hits
IPR057551	STR	DC_0197	102	189	InterPro cluster	Straight fiber protein PB4, second Fn3-like domain	N-terminal	Medium	Text match	230 proteins / 230 hits
IPR057552	STR	DC_0003	205	329	InterPro cluster	Straight fiber protein PB4, third Fn3-like domain	Central	High	Text match	998 proteins / 1603 hits
IPR036116	STR	IPR036116	228	292	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR057549	STR	DC_0351	345	546	InterPro cluster	Straight fiber protein PB4, spike domain	C-terminal	High	Text match	247 proteins / 290 hits
PTHR24637	Unmapped	-	539	1061	PANTHER	COLLAGEN	-	-	-	-
IPR057549	STR	DC_0351	1049	1164	InterPro cluster	Straight fiber protein PB4, spike domain	C-terminal	High	Text match	247 proteins / 290 hits

Proteins with similar domain architecture

Phage

Vibrio phage vB_VorS-PVo5 [NCBI] · taxon 1689660

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Vibrio ordalii [NCBI] · taxon 28174

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

AKY02257.1 [NCBI]

Genbank nucleotide accession

KT345706 [NCBI]

CDS location

range 47142 -> 50699
strand -

CDS

ATGATTGAGAATACATTACCAAGAAAACTATATATTGGTACTATTGTTCCGGGATATACTAAACTGTATATCCCTCACTCTACCTACGAAGATGAAGATATTGTGGGTAAAGCTTTTTGGATCAACGGTACTAGATTTATAGATACAAATATAGACGTCTTTTATACTATAGTAGATGGATTAACTCCGGACACCGAGTATAAAGATATACAAGGCTCATACTACGACGCCTTGGTWGATACTGAGTTGTTAGATAATAAGCTAGGCATCAACCTATCTGATACAGCACTAGCAAAAACACTCACTTACCCTACAATTACAAACGTAGAAGTAAGTGCCCAGGAGGTCGAYATAGGTGTGGGCGATCCTTTAGTAACTATGGATATTGGAGGAGATGCTCAAACAGTTCGTATAGACAAGAAGTTGTCTAGTGAAGATGATACGCATTGGGTTCCTGCATACAGCGGAGCACCGGATGCTGTATCCTTCACATCGGGACAAGGTACMTAYGATTTTAGAGTAGTTGGTTCAGTATTCTTACCCGACGGTGTCACTAAAGAAGAATCTCCTTATARTATAATTAGAAATATAAAAGTAGAGAATATGTTCAGGCCACCAAGTGCCCCAGAGAATATAGATTTCAAGGTGGCCAAGATCATGGATGGTATTGAGCGATATGACCTACAAGTTAGYTGGGACTGGAACAAAGGTACTGGCAGCTCTGTTCGAGAATTTGTTCTTTACTTTGTAGAATCTAGCGAGTATAATAAAACTCAATGGAGTAAGGCAAGCAAGATTAACAGTGGTGCTGCTAAGGCTGCGGTCATCACAAGCTTTCCTTTTAATAAAGAATATAAATTTAAAATAGCTGCGATAGCGTGGGGGCCTGCAGACCAAGCCCTTACAGACTCTGTAGGTGCTTCTTTTAAAATCACTAACAATACTCCTCTAGACTCTTCTTTTACTAACGAGACGGGTATAGAGGTCACCTATGACCATATTAAGGCATACAGAGATATTGCTGGGTCTAAAGAGCAAACCTTCCGTTTAGATGCGAAGACAGGCTCTCTAGCAATTGGTAAATTAGATCAGCAAGGGCATGCGCCTATATCAGTAGATCCGGTTAAYGGTAACGTTAATGTGGATGGGKCTGTTATATCAAAAACCATGTACTCAGCATCTTTTGTTCTCTCTAACTTGTCTGGTAAAGATAACCCAGAGATACGTACAGCGTCTAAAACTGGCTATGGTCAGGCGGCACAAGGTATGTGGATGGGGTACTCTAATAATGACCATAAATTTAGGTTTGACTTAGGTGACTCTACTAGGTTTATTAGATGGGATGGTGAGAAGCTGCTTATTTCAGGTAAAGTACAAATCGGTACTCCGGGAGGTAACGTAGATATCGGTGAAGGTATCCAAGGTAACTTCGTAGCCAATATCTATACAGACGCAGCGACACAACCTAGTGCACCTACCGGAACTGACTACCCGCCTGCGGGCTGGAAAGATACCCCTATAACAAATCCACAAGACTTGGTTTGGATTTCTACTGCTGTTATAGATTCAAAGACTAATAAAGTAGCTTCTAATAGCGCATGGTCTACTCCAATCCAGTTCACTGCAAAAGCAGGGGAGGATGGTGTAGCTTCCGTACTCATCTATAAAGCATCTACTGTACAACCTACTACTCCTACTAACAAATCTATCCCACCTGCGGGATGGTTATTACAGGCTCCTCCTAGAGCCGTAGGAGAATCTATTTGGGTATCTAGTGCAGTGAGAAAAGGGTCAGAGCCTAACATTACAGGTAACTGGTCAGCCCCTGCTAAGTTTAGTGGTGACCAAGGTGACCAAGGTATTCCGGGTCAAAACGGTAAGGACGGGGAAACTTTCTATACTTGGATTAAATATGCGGATACTATCTCAGGTGCAGGTATGAGTAACTCGCCAACAGGCAAGCGCTACATAGGTATAGCTAGTAACATGCCTAGCTCTACAGAAAGTAATAACCCTGCAGATTACACCTGGGCGTTAATGCGAGGTGACCAAGGTATCCCAGGTACTAATGGTAAAGACGGTAGTACTTATTATACTTGGATTAAGTATGCTGACGACAGTGCAGGGCATGGTCTTACAGACGATCCTACAGGTAAAGCCTACCTAGGTATAGCAACCAATAAAACAGTACAACAGGAAAGTAGTGACTGGCGCGACTATAAATGGAGTAAGATCCAAGGCGAGAAAGGTGACACAGGTATTCCTGGACGAGACGGAAAAGATGGAAAGACCTACTATACTTGGGTTAAATACGCTGACTCCACTCARGGGGCAGGTATGTCTGACAATCCAGCAGGTAAAAAATATATAGGTATAGCGGTAAATCARYTATCCCCAACAGAGAGTACTAATCCTAGTGTATATACATGGAGTAAGTTTGAAGGAGAYCAAGGTGTTCCAGGTCAACCAGGAGCAGACGGGGTAACTCACTATACTTGGATTAAATACGCAGATACTGCAACAGGTAGTGGTATCTCCAACAGCCCTACAGGCAAAGAGTATATTGGTTTCGCTTACAACAAGCTCTCAGCTTCCGAAAGCTCTAACCCTTCTGACTACATATGGAGTCGTATCAAAGGAGATAAAGGAGATAAGGGAGATCCTGGACGGGATGGTATCCCTGGAGAACCTGGCAAAGACGGCCAAACTACTTATACTTGGATACGCTATGCGGATAACGCTAACGGTAGTGGAATGACCAATACCTCTGCTGGTAAAAAGTATATTGGTATAGCCGTTAACAAAACAACACCTACCGAAAGCAACAACCCTAGCGATTATTCTTGGAGTAAACTTGAGGGTGATCAGGGTGTTCCAGGTAAGCCCGGGAAAGATGGTATAACTTACTATACTTGGATCAAATATGCTGACAACTCTAGTGGYAGTGGTATGTCTAATAGCCCTAGYGGTAAGAAGTACATAGGTTTCGCATATAATAAGACTACCTCTACTGAAAGTAACAGTCCTCAAGACTACGTATGGTCTAAGTTTACCGGTGATGACGGCAGACCAGGCAGGGACGGTGAAGACGGTAAAGATGGTGAGCCAGGTAAAGATGGTGAGCCAGGTAAAGACGGTAGGCCAGGTAAAGATGGTAAAGATGGAGATGATGGTGAAAGAGGCCCAGGCTTCTATGCTCAGGCTATTAGCAACTTCTCTAGATTCAATACTTCATCTGCTACCTCCTTCTTTAGAAGTACTTTCGGAACAGCTCCAGTTAAGTATGATGTACTAACTCAATTCAATCCTAGCAACCCCGCAGCTGCCGAAACTCGTCAGTGGAATGGTTCTAGTTGGGTTAGCGCTGCACTGCTTGTGCATGGTAATATGATTGTTAACGGTTCTATTACTGCTAAGAAAATTATAGCTAGTGATGCCTTTTTACAACAAATAGGTGTTAACAGAATATATGACAATGCTGCGGCACAGTCATCAAACCCTGAATCTCGTTATAAAATGAAGATAGATCTACAAGGTGGGTCTATACATATAAGATAA

Title	Authors	Date	PMID	Source
Complete Genome Sequence of Vibrio ordalii Bacteriophage pVo5	Echeverria-Vega,A.B., Morales-Vicencio,P.A., Saez-Saavedra,C.F. and Araya,R.	2016-07-04	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature