Phage RBP Database

Genbank accession

LC727899.1_CDS_[52793..53062] [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

Seq2Symm

C3 confidence 0,808

C3	0,808
C1	0,003
C2	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MNVLKKLMQRLCGCGKHDDREHGELLTAQLRLGPADILESDENGIIPEQDRVITQVVILDADKKQIQCVVRPLQILRADGRWENIGGMK

Physico‐chemical properties

protein length:	89 AA
molecular weight:	10044,58270 Da
isoelectric point:	6,07355
aromaticity:	0,01124
hydropathy:	-0,37079

Domain architecture

LC727899.1_CDS_[52793..53062]

1 89 aa

RBD 28–89

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR009640
RBD

IPR009640

LC727899.1_CDS_[52793..53062]

189 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0291
ATT

DC_0291

LC727899.1_CDS_[52793..53062]

189 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR009640	RBD	DC_0593	28	89	InterPro cluster	Bacteriophage 933W, L0121, tail fibre, C-terminal	C-terminal	Low	Positional only	120 proteins / 125 hits

Proteins with similar domain architecture

Phage

Stx1a-converting phage Stx1_JNE111036 [NCBI] · taxon 2977493

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

LC727899.1_CDS_[52793..53062] [NCBI]

Genbank nucleotide accession

LC727899.1 [NCBI]

CDS location

range 52793 -> 53062
strand +

CDS

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)