Phage RBP Database

Genbank accession

XSD90624.1 [GenBank]

Protein name

tail protein

RBP type

TF

Evidence RBPdetect

Probability 0,88

TF

Evidence RBPdetect2

Probability 0,59

Protein sequence

MATIELPVIKIKNLSDKTLVTGSDEIIIQSSTDTEKTSINKFITDIGLLKRSEVTGITGASVIGTHSGATVQQVLDSLSNSWQNLYYFSTTGNEIGTHVDTIALSPVQRTYGVQISTPLASFSPKVDNVLSNGTTSLRWSQVYAVNSVISTSNKKKKTNLRQITPTEAKAFYEIGKLDSVWQWLSKYSSEKGAARLHSGPTVQDAIKVMLKHGLDWTKYSAFCYDSWEANGDTPAGEEFAFRKEELLFWILRATISVQEDLDKRLSALENSLSGN

Physico‐chemical properties

protein length:	275 AA
molecular weight:	30309,78190 Da
isoelectric point:	6,44511
aromaticity:	0,08364
hydropathy:	-0,26327

Domain architecture

XSD90624.1

1 275 aa

RBD 138–233 · CHP 234–272 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR036388
RBD

IPR036388

IPR030392
CHP

IPR030392

IPR030392
CHP

IPR030392

cd10144
CHP

cd10144

XSD90624.1

1275 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0783
STR

DC_0783

XSD90624.1

1275 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036388	RBD	IPR036388	138	233	Merged direct domain	Winged helix-like DNA-binding domain superfamily	C-terminal	Low	Positional only	96 proteins / 96 hits
IPR030392	CHP	DC_0088	152	213	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	152	272	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
cd10144	CHP	DC_0088	152	256	InterPro cluster	cd10144	C-terminal	High	Text match	3502 proteins / 3959 hits

Proteins with similar domain architecture

Phage

Klebsiella phage vB_Kpn_K54_rec6 [NCBI] · taxon 3412937

Viruses

Host

Klebsiella pneumoniae [NCBI] · taxon 573

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

XSD90624.1 [NCBI]

Genbank nucleotide accession

PQ569692 [NCBI]

CDS location

range 50766 -> 51593
strand -

CDS

ATGGCTACAATAGAACTACCTGTTATCAAGATAAAAAATCTTTCTGATAAAACTCTTGTGACAGGCAGTGATGAAATTATTATCCAATCTTCCACTGACACTGAGAAGACATCCATTAATAAGTTCATCACCGATATAGGACTTCTGAAAAGAAGTGAAGTAACAGGTATCACAGGTGCCTCCGTCATAGGGACTCACTCGGGGGCTACTGTACAGCAAGTTTTGGATAGTCTTTCTAATAGTTGGCAGAACTTATATTATTTCTCTACTACTGGGAATGAGATCGGAACACATGTTGACACCATTGCCCTTAGCCCTGTGCAAAGAACTTATGGTGTTCAAATATCAACACCTTTAGCATCATTTTCTCCTAAGGTAGACAATGTATTGTCCAACGGTACAACATCCCTACGTTGGAGTCAAGTGTATGCAGTTAACAGTGTAATCTCCACCTCAAATAAAAAGAAGAAAACAAATCTTCGACAAATCACACCTACAGAAGCAAAAGCTTTTTATGAAATTGGGAAACTAGATTCTGTATGGCAATGGTTGTCTAAATACTCTTCTGAAAAGGGTGCTGCTAGGCTTCATTCAGGGCCTACTGTGCAGGATGCTATTAAGGTCATGCTCAAACACGGTCTCGATTGGACCAAGTATTCAGCTTTCTGCTATGATAGCTGGGAAGCGAATGGGGATACTCCCGCAGGTGAAGAATTCGCTTTTAGAAAAGAAGAACTCTTATTTTGGATACTTAGAGCAACAATTTCGGTGCAGGAAGATCTTGACAAGCGCCTTTCAGCCTTGGAAAATTCTCTGTCCGGTAACTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)