Phage RBP Database

UniProt accession

H6WBM7 [UniProt]

Protein name

Phage tail component protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,53

Seq2Symm

C1 confidence 0,957

C1	0,957
C3	0,003
I	0,002

Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).

Protein sequence

MGCSGKNHYGVIIAAHPTQGPVTHYLDDIEVTPDEDGFVTTHPIRWSENGANHCKLRTYTGAAGQAVDPIWRAVFPQVADSDDFAGLSYAALYASHCAMELAATIYQTGREWVYAPVWDGENRILDPRTGLRGWTNNAALVIADIATRWYGKTVDWDEVAAEADICDEWVTNRDGGTQRRWTINTVIRGNMTWEETRAHLMMCCDAWFYERRDGKLGFKVGYYSAPTLTLTDADFSAVNLKHKSTGVDDVYSYAMRYVEPALDWSQEVTGAVVVGSNPATARDEQECYGIDSHNQAWRAVYRWAQSARPEWRLSGTLKYIGREAMERRFVRVQLAELGLDAVFEVATLARNGGSHSWSLDAVSVEAADFAPDALTLEPARPVRTTVASDDTVGAPASLSGEVVEGTGGVAQIEWSWPVQPDSLMPRLRVRQDGGDWQEITLAHSTSSYLMTGLRDGSTYEAQIRNVTGAARVSAWAPEAPVSVEAVANTTPPAAMAYFSAMASGSSVALSWTAPNSASYAAARIYRATGSTDIDDASLIGLEYGAPNATDEWLDPGPGAGAHSYWIEPVNGSGIGGPISGPQTITIS

Physico‐chemical properties

protein length:	587 AA
molecular weight:	63713,90770 Da
isoelectric point:	4,75182
aromaticity:	0,09710
hydropathy:	-0,26882

Domain architecture

H6WBM7

1 587 aa

STR 388–517 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR013783
STR

IPR013783

IPR003961
STR

IPR003961

IPR036116
STR

IPR036116

H6WBM7

1587 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0187
STR

DC_0187

H6WBM7

1587 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR013783	STR	IPR013783	388	492	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003961	STR	DC_0003	394	486	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR036116	STR	IPR036116	402	517	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits

Proteins with similar domain architecture

Phage

Rhodobacter phage RcapNL [NCBI] · taxon 1131316

Uroviricota Caudoviricetes Capnelvirus

Host

Rhodobacter capsulatus SB 1003 [NCBI] · taxon 272942

Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Rhodobacter

Genbank protein accession

AFA44864.1 [NCBI]

Genbank nucleotide accession

JQ066768 [NCBI]

CDS location

range 15669 -> 17432
strand +

CDS

ATGGGATGCTCGGGCAAAAACCATTACGGCGTGATCATCGCGGCGCATCCGACGCAGGGGCCGGTGACGCACTACCTCGACGATATCGAGGTGACGCCGGACGAAGATGGCTTTGTCACCACCCACCCAATCCGCTGGAGCGAAAACGGCGCCAACCACTGCAAGCTGCGCACCTACACCGGCGCCGCTGGTCAGGCTGTCGATCCGATCTGGCGCGCGGTTTTTCCGCAGGTTGCCGATTCCGACGATTTTGCCGGGTTGAGCTATGCGGCGCTTTACGCCTCCCACTGCGCAATGGAGCTGGCGGCAACGATTTACCAGACCGGGCGCGAGTGGGTTTATGCGCCCGTCTGGGATGGCGAAAACCGCATCCTTGACCCGCGGACAGGCCTGCGCGGCTGGACCAACAACGCGGCCTTGGTGATCGCCGATATCGCAACCCGCTGGTATGGCAAAACGGTCGATTGGGACGAGGTGGCGGCCGAGGCGGACATCTGCGACGAGTGGGTGACCAACCGCGACGGCGGCACCCAGCGGCGCTGGACGATCAATACCGTGATCCGTGGCAACATGACTTGGGAGGAGACCCGCGCGCACCTGATGATGTGCTGTGACGCGTGGTTTTACGAACGCCGCGACGGCAAGCTTGGTTTTAAGGTGGGCTACTATTCGGCCCCGACGCTGACCCTGACCGATGCCGATTTCTCGGCGGTCAACCTCAAGCACAAAAGCACTGGCGTCGATGACGTCTACAGCTATGCGATGCGCTATGTCGAGCCTGCTCTCGACTGGTCGCAGGAGGTCACTGGCGCGGTCGTCGTCGGCAGCAACCCGGCGACCGCCCGGGACGAGCAAGAGTGCTACGGGATTGACAGCCACAATCAGGCGTGGCGCGCGGTCTATCGCTGGGCCCAATCGGCGCGGCCGGAATGGCGGCTGTCGGGCACTTTGAAATACATCGGGCGCGAGGCAATGGAGCGGCGCTTTGTCCGGGTGCAGCTGGCCGAGCTTGGCCTTGACGCCGTTTTCGAGGTTGCCACGCTTGCCCGCAATGGCGGATCGCACAGCTGGTCGCTGGACGCCGTCAGCGTCGAGGCCGCCGATTTCGCGCCGGATGCCCTGACGCTGGAGCCCGCGCGCCCGGTGCGGACGACAGTTGCGAGCGATGACACCGTAGGCGCCCCCGCGTCCCTGTCTGGCGAGGTTGTCGAAGGCACCGGCGGCGTGGCGCAGATCGAATGGTCATGGCCGGTGCAGCCTGACAGCCTGATGCCGCGGCTGCGGGTGCGGCAGGATGGCGGGGATTGGCAGGAGATCACCTTGGCGCACAGCACGTCGTCCTACCTGATGACCGGGTTGCGCGACGGGTCTACTTATGAGGCGCAGATCCGCAATGTCACTGGCGCCGCCCGGGTATCTGCGTGGGCGCCGGAAGCTCCCGTCAGCGTCGAGGCCGTGGCGAACACAACGCCGCCAGCGGCGATGGCCTATTTCTCGGCGATGGCCAGCGGCTCCAGCGTCGCCCTGTCGTGGACCGCACCGAACAGCGCCAGCTATGCCGCGGCCCGGATTTATCGCGCCACCGGCAGCACTGACATTGATGACGCCTCCCTGATCGGGCTCGAGTACGGCGCCCCGAATGCCACCGACGAATGGCTCGACCCCGGGCCAGGCGCTGGGGCGCACAGCTACTGGATCGAGCCGGTCAACGGCTCCGGTATCGGCGGCCCCATCAGCGGCCCGCAAACCATCACCATCTCCTGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)