Protein

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UniProt accession
H6WBM7 [UniProt]
Protein name
Phage tail component protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MGCSGKNHYGVIIAAHPTQGPVTHYLDDIEVTPDEDGFVTTHPIRWSENGANHCKLRTYTGAAGQAVDPIWRAVFPQVADSDDFAGLSYAALYASHCAMELAATIYQTGREWVYAPVWDGENRILDPRTGLRGWTNNAALVIADIATRWYGKTVDWDEVAAEADICDEWVTNRDGGTQRRWTINTVIRGNMTWEETRAHLMMCCDAWFYERRDGKLGFKVGYYSAPTLTLTDADFSAVNLKHKSTGVDDVYSYAMRYVEPALDWSQEVTGAVVVGSNPATARDEQECYGIDSHNQAWRAVYRWAQSARPEWRLSGTLKYIGREAMERRFVRVQLAELGLDAVFEVATLARNGGSHSWSLDAVSVEAADFAPDALTLEPARPVRTTVASDDTVGAPASLSGEVVEGTGGVAQIEWSWPVQPDSLMPRLRVRQDGGDWQEITLAHSTSSYLMTGLRDGSTYEAQIRNVTGAARVSAWAPEAPVSVEAVANTTPPAAMAYFSAMASGSSVALSWTAPNSASYAAARIYRATGSTDIDDASLIGLEYGAPNATDEWLDPGPGAGAHSYWIEPVNGSGIGGPISGPQTITIS
Physico‐chemical
properties
protein length:587 AA
molecular weight: 63713,90770 Da
isoelectric point:4,75182
aromaticity:0,09710
hydropathy:-0,26882

Domains

Domains [InterPro]
IPR013783
388–492
IPR013783
IPR003961
394–486
IPR003961
IPR036116
402–517
IPR036116
H6WBM7
1 587
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodobacter phage RcapNL
[NCBI] 		1131316 Uroviricota > Caudoviricetes > Capnelvirus >
Host Rhodobacter capsulatus SB 1003
[NCBI] 		272942 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Rhodobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFA44864.1 [NCBI]
Genbank nucleotide accession
JQ066768 [NCBI]
CDS location
range 15669 -> 17432
strand +
CDS
ATGGGATGCTCGGGCAAAAACCATTACGGCGTGATCATCGCGGCGCATCCGACGCAGGGGCCGGTGACGCACTACCTCGACGATATCGAGGTGACGCCGGACGAAGATGGCTTTGTCACCACCCACCCAATCCGCTGGAGCGAAAACGGCGCCAACCACTGCAAGCTGCGCACCTACACCGGCGCCGCTGGTCAGGCTGTCGATCCGATCTGGCGCGCGGTTTTTCCGCAGGTTGCCGATTCCGACGATTTTGCCGGGTTGAGCTATGCGGCGCTTTACGCCTCCCACTGCGCAATGGAGCTGGCGGCAACGATTTACCAGACCGGGCGCGAGTGGGTTTATGCGCCCGTCTGGGATGGCGAAAACCGCATCCTTGACCCGCGGACAGGCCTGCGCGGCTGGACCAACAACGCGGCCTTGGTGATCGCCGATATCGCAACCCGCTGGTATGGCAAAACGGTCGATTGGGACGAGGTGGCGGCCGAGGCGGACATCTGCGACGAGTGGGTGACCAACCGCGACGGCGGCACCCAGCGGCGCTGGACGATCAATACCGTGATCCGTGGCAACATGACTTGGGAGGAGACCCGCGCGCACCTGATGATGTGCTGTGACGCGTGGTTTTACGAACGCCGCGACGGCAAGCTTGGTTTTAAGGTGGGCTACTATTCGGCCCCGACGCTGACCCTGACCGATGCCGATTTCTCGGCGGTCAACCTCAAGCACAAAAGCACTGGCGTCGATGACGTCTACAGCTATGCGATGCGCTATGTCGAGCCTGCTCTCGACTGGTCGCAGGAGGTCACTGGCGCGGTCGTCGTCGGCAGCAACCCGGCGACCGCCCGGGACGAGCAAGAGTGCTACGGGATTGACAGCCACAATCAGGCGTGGCGCGCGGTCTATCGCTGGGCCCAATCGGCGCGGCCGGAATGGCGGCTGTCGGGCACTTTGAAATACATCGGGCGCGAGGCAATGGAGCGGCGCTTTGTCCGGGTGCAGCTGGCCGAGCTTGGCCTTGACGCCGTTTTCGAGGTTGCCACGCTTGCCCGCAATGGCGGATCGCACAGCTGGTCGCTGGACGCCGTCAGCGTCGAGGCCGCCGATTTCGCGCCGGATGCCCTGACGCTGGAGCCCGCGCGCCCGGTGCGGACGACAGTTGCGAGCGATGACACCGTAGGCGCCCCCGCGTCCCTGTCTGGCGAGGTTGTCGAAGGCACCGGCGGCGTGGCGCAGATCGAATGGTCATGGCCGGTGCAGCCTGACAGCCTGATGCCGCGGCTGCGGGTGCGGCAGGATGGCGGGGATTGGCAGGAGATCACCTTGGCGCACAGCACGTCGTCCTACCTGATGACCGGGTTGCGCGACGGGTCTACTTATGAGGCGCAGATCCGCAATGTCACTGGCGCCGCCCGGGTATCTGCGTGGGCGCCGGAAGCTCCCGTCAGCGTCGAGGCCGTGGCGAACACAACGCCGCCAGCGGCGATGGCCTATTTCTCGGCGATGGCCAGCGGCTCCAGCGTCGCCCTGTCGTGGACCGCACCGAACAGCGCCAGCTATGCCGCGGCCCGGATTTATCGCGCCACCGGCAGCACTGACATTGATGACGCCTCCCTGATCGGGCTCGAGTACGGCGCCCCGAATGCCACCGACGAATGGCTCGACCCCGGGCCAGGCGCTGGGGCGCACAGCTACTGGATCGAGCCGGTCAACGGCTCCGGTATCGGCGGCCCCATCAGCGGCCCGCAAACCATCACCATCTCCTGA

Tertiary structure

PDB ID
cd90c975d40559caf17bc65301a29c2563a3d325b62e9610ed90e76783718b92
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8949
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50