Phage RBP Database

Genbank accession

YP_001595467.1 [GenBank]

Protein name

putative tail fiber protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,98

Protein sequence

MAKGYSLDALVNEHYIKSRTGLGNISIDTITGMDSVGVYYQSRNDYATLANKYPPGANAGTLEVLPHNANVGRVMQRYTNFSNKRMWVRSQNGTVSDANFDEWTEFVNMNNIYNAIYPIGIVVKFDNATNPNNNFTGTVWEQIIDGRVARAATGPEAGTADGQIGSIAGSDTANIAVTNLPGHTHGMQNHTHGIASHSHTMAHTHTINHDHGAVTSSSSGAHTHSVSGTAASAGAHQHTEGSPFTGDVNFGTTTSTSKDNISDWLYSPSTRYPLTSSSGAHTHSVSGTAASAGAHTHSVDLPNFTGTSGGSSTGNTGGTALTTGGPSNNTTTSTGDGTAFDVRNASHYYAFWKRVA

Physico‐chemical properties

protein length:	356 AA
molecular weight:	37352,93110 Da
isoelectric point:	6,37469
aromaticity:	0,07865
hydropathy:	-0,48343

Domain architecture

YP_001595467.1

1 356 aa

STR 18–95 · ATT 113–239 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

cd19958
STR

cd19958 IPR053827

YP_001595467.1

1356 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0905
STR

DC_0905

YP_001595467.1

1356 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
cd19958	STR	DC_0464	18	95	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
IPR053827	ATT	DC_0313	113	239	InterPro cluster	Baseplate structural protein Gp10, C-terminal domain	C-terminal	Medium	Text match	489 proteins / 489 hits

Proteins with similar domain architecture

Phage

Escherichia phage phiEcoM-GJ1 [NCBI] · taxon 451705

Uroviricota Caudoviricetes Chaseviridae Carltongylesvirus Carltongylesvirus GJ1

Host

Escherichia coli [NCBI] · taxon 562

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

YP_001595467.1 [NCBI]

Genbank nucleotide accession

NC_010106 [NCBI]

CDS location

range 49866 -> 50936
strand +

CDS

ATGGCTAAAGGTTATTCTTTAGATGCGTTGGTGAATGAGCACTACATAAAGTCTCGTACCGGCCTGGGTAATATAAGTATAGACACTATCACGGGAATGGATAGTGTTGGAGTATATTACCAATCACGCAACGATTATGCCACCCTTGCAAATAAATATCCTCCAGGTGCTAATGCAGGTACTCTTGAAGTGTTGCCCCATAATGCCAACGTTGGCAGGGTAATGCAACGTTATACAAACTTTAGTAATAAGCGTATGTGGGTGAGAAGTCAGAATGGCACGGTATCGGATGCTAACTTTGACGAGTGGACTGAGTTCGTTAACATGAACAACATCTACAACGCAATCTATCCGATTGGCATTGTCGTCAAGTTTGACAACGCCACCAACCCGAACAACAACTTCACCGGAACTGTGTGGGAACAAATCATTGATGGTCGTGTTGCCCGTGCTGCAACTGGTCCGGAAGCTGGGACGGCTGATGGTCAGATTGGTTCAATAGCTGGGTCCGATACAGCCAACATTGCTGTAACCAACCTACCAGGCCACACACACGGGATGCAGAACCACACCCACGGCATCGCATCCCACTCCCACACAATGGCCCACACCCACACCATCAACCACGACCACGGTGCGGTAACATCTAGCTCTTCTGGTGCTCACACGCACAGCGTTAGTGGCACTGCCGCCTCTGCTGGTGCTCACCAACATACAGAAGGCTCTCCATTTACAGGAGATGTCAACTTTGGCACTACCACAAGCACCAGCAAGGACAACATATCTGATTGGCTCTACAGCCCGTCTACCAGGTATCCGCTAACTTCGTCCTCTGGTGCACACACCCACTCTGTGAGTGGTACAGCCGCCTCTGCTGGTGCTCATACTCACTCTGTTGACTTACCTAACTTCACAGGTACAAGTGGAGGCTCCAGCACAGGTAACACAGGCGGTACGGCACTGACTACTGGTGGTCCTAGCAACAACACTACTACCTCAACTGGTGACGGCACAGCGTTCGATGTTCGCAACGCCTCACATTACTATGCCTTCTGGAAACGGGTGGCTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)