Protein

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Genbank accession
AOO03543.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,73
Seq2Symm
C1 confidence 0,893 truncated
C1 0,893
C2 0,007
I 0,005
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MSLTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVIDNRPGKVLYTDVPPIDSNSNLDLTSPNNVLYYYNSVEGGVIVPRGCSLVGTDLRRTKIIPKYVPYPTTYTAKGINTEDDVPPRTAIFKVTGGTYFWQFSFFDGAEEGVYFKPDSTETLSPKFSHHRLTCFEFADGLNPLSKLISDGTVPNTDYSAVPNILERTDLDIYYQKVSKAFATIPDTSGDPTTDQIQARVEENRIVGPISDEYRVLQITRNGQTATAVTVDEFDNPRDHGFSVGVNINVSGVTGSTGPQSEVDATVFNGSFTVTSTPTGSTFTYQLASVPSGNAVGSNVTVKTEIDTVDSASPYAFNLSLRSVWGMNGMHANGAKATGFKSMVVAQFTGLSLQKDDRAFVRYNASTGNYDVATAGDGAHLDGFAEYRKGWGHEHIKCSNDSFIQAVSVFAVGYFGHFTAESGADMSITNSNSNFGNTALRSAGFKAKAFSKDKAAEITHIIPPKALNVISTTATGASGSPNITLANDGSINGVIEGMTVSGTNLAAGATVVSFNTNTRVITLSGNNTAAVDTNIIFGEETSVNWVNVDIQRTKVINSALSGQGGIAGSRLYLYGYVTEASPPTTKVQGFAIGSRQDGTGVDAIPDKLNVLLVANGASSATVQTAKISPYGPDVSNKAAGDTGSPLQYDSATYTINGQAGSVGGWYLSVDPNDNQIYTTLSTNSQYNNVNFTPTTFIKRIPDPRDLQDRTYRVRMVIDKDKTNPLPRDPLSGYVVQPLNSDTTSYNLNRTFYIYDIEVVQKFERGVKDGIYYITLLCASIAPSTSNFNDRKFSQNVNEVYPTFDRDNPVADPVAAISVADNETIGLVNATDGANPTPNKDPKLSITKEAIKFLLTDTGWTQPGTTPNYDSVNGRLSNVELTARAGNEETRKINIRENNDGTVAPINVEFRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQVKFSQSIKEEAGVAFYSGLNSNGDLFIGNQIINPVTGQITNEDIAQLNVVGEENTTIQTFSELVLTDKLTVIGGASNQLESIFAGPVTFQAQTSFTNNLTAKKITYNNQDGTVIKQTLLAPADANGQPSFAAITGYDTPGNGDLVYNINWTPGQSLGWIYYNGTWHEFGLTDTGDINIDTFNNEQHIGIGTAAVSNFRVGILGSAKVDGDLVVTGRGGVGADKYVTKTYTGDGTTLTFAVTTYSGGIQHSDDSLLVFLNGVAQIAGTNYTVDANGANVVFSSGDAPQSTDTVHILELPI
Physico‐chemical
properties
protein length:1321 AA
molecular weight: 142084,43850 Da
isoelectric point:4,85583
aromaticity:0,09387
hydropathy:-0,26889

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
AOO03543.1
1 1321 aa
Domain Start End Length (AA) Confidence
N-terminal 1 91 91 0,9043
Central domain 92 310 220 0,9536
C-terminal 311 1321 1010 0,0999
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Synechococcus phage S-RIM2 [NCBI] · taxon 687800
Uroviricota Caudoviricetes Pantevenvirales Nerrivikvirus Nerrivikvirus srim2
Host
Synechococcus [NCBI] · taxon 1129
cellular organisms Bacteria Bacillati Cyanobacteriota/Melainabacteria group Cyanobacteriota Cyanophyceae

Coding sequence (CDS)

Genbank protein accession
AOO03543.1 [NCBI]
Genbank nucleotide accession
KX349254.1 [NCBI]
CDS location
range 22602 -> 26567
strand +
CDS
ATGTCTCTAACTAGACTTAAGAATATTATTACGTCCCGCACGGGACGTATTATTTACGTTAACCCTGACGACTTTGATGCTTCTGATGCTATTGACAACAGAGGCAACTCAGCATTGCGTCCGTTTAAGTCTATTCAAAGAGCATTTCTTGAAGTTGCTAGATTTTCGTATCGTGTTGGTCTGAGTAATGACGAATTCGATGCGTTCAGTATCATGCTCTACCCTGCAGAGTATGTGATCGATAACCGTCCTGGTAAAGTTCTTTATACTGATGTCCCTCCTATTGATTCTAACTCTAATCTGGACCTGACTTCACCTAATAATGTTTTGTATTATTACAACTCAGTAGAAGGAGGAGTCATTGTTCCCAGAGGTTGTTCGCTGGTTGGCACCGACTTACGTCGTACCAAGATTATTCCTAAGTACGTTCCTTATCCTACGACATATACTGCGAAGGGAATCAACACAGAGGATGATGTTCCTCCCCGCACCGCAATCTTCAAGGTCACAGGTGGTACATACTTCTGGCAGTTCTCCTTCTTCGATGGTGCTGAGGAAGGTGTATACTTCAAACCCGATAGCACTGAAACTCTTTCCCCCAAGTTCTCACACCATAGACTAACTTGCTTTGAGTTTGCTGATGGTCTCAATCCTCTTTCCAAGTTAATCTCTGACGGCACTGTTCCTAACACAGATTATTCTGCTGTGCCTAACATTCTAGAGAGAACTGACCTAGACATTTACTACCAGAAAGTATCGAAGGCATTCGCAACTATTCCTGATACATCTGGTGATCCTACTACTGACCAGATTCAGGCAAGGGTCGAAGAAAACAGAATCGTTGGTCCTATTTCCGATGAATACAGAGTCCTTCAGATCACAAGAAATGGTCAGACAGCAACGGCAGTTACTGTTGATGAGTTTGATAACCCCAGAGACCATGGATTTAGTGTTGGCGTCAACATTAACGTTTCAGGTGTTACTGGATCAACTGGACCGCAATCCGAAGTTGATGCAACAGTTTTTAACGGATCTTTCACCGTCACTTCGACGCCAACTGGTAGCACATTTACTTACCAGTTAGCATCTGTACCATCAGGTAATGCTGTTGGTTCTAATGTTACTGTTAAGACTGAAATTGATACTGTTGACTCTGCATCTCCATATGCATTCAACCTGTCACTGAGAAGTGTTTGGGGTATGAATGGTATGCACGCGAACGGTGCTAAGGCAACTGGTTTCAAATCGATGGTTGTTGCACAGTTCACGGGTCTATCTCTACAGAAAGATGATAGAGCGTTTGTAAGATATAATGCTTCTACTGGTAACTATGATGTAGCAACTGCTGGTGATGGTGCTCACCTGGATGGTTTTGCTGAGTATCGTAAAGGATGGGGACATGAGCACATTAAGTGTTCTAATGACTCCTTCATTCAGGCGGTTTCGGTGTTCGCTGTTGGATACTTCGGTCACTTCACTGCTGAAAGTGGTGCTGACATGTCAATCACCAACTCCAACAGTAACTTTGGAAACACTGCGTTAAGATCTGCTGGATTTAAGGCAAAAGCATTCTCCAAGGATAAAGCAGCAGAGATTACTCATATCATTCCACCTAAGGCACTGAACGTTATTTCGACAACTGCAACAGGTGCTTCAGGTTCGCCAAATATCACACTTGCTAATGATGGTAGCATCAACGGTGTTATCGAAGGTATGACAGTTTCTGGAACTAATCTTGCTGCTGGTGCTACTGTTGTTTCCTTCAACACTAACACTAGAGTTATCACACTGTCTGGAAATAATACAGCAGCAGTTGACACTAACATCATCTTTGGTGAAGAAACATCTGTCAACTGGGTTAACGTTGATATTCAACGCACTAAGGTAATCAACTCTGCACTTTCTGGTCAGGGTGGTATTGCTGGTTCTAGACTTTATCTCTATGGATATGTCACGGAAGCATCTCCTCCAACAACAAAGGTTCAAGGTTTTGCTATTGGATCACGTCAAGATGGCACAGGTGTTGATGCTATACCAGACAAACTGAATGTACTTTTGGTTGCTAATGGTGCATCTTCTGCAACAGTTCAGACTGCTAAGATTTCACCTTATGGTCCTGATGTTTCCAACAAAGCAGCAGGTGATACTGGTTCACCTCTGCAATATGATAGTGCAACATACACTATCAATGGTCAAGCAGGTTCCGTTGGTGGTTGGTATCTGAGTGTAGATCCTAACGATAATCAAATCTACACAACTCTTTCTACCAACTCACAGTACAACAACGTAAACTTCACCCCTACAACTTTCATTAAGAGGATTCCTGACCCTCGTGACCTGCAGGATAGAACATATCGTGTCCGCATGGTTATCGATAAGGATAAGACTAATCCTCTGCCTCGTGATCCTCTCAGCGGTTATGTTGTACAACCTCTGAATAGTGACACTACAAGTTACAATCTGAACAGAACATTCTATATCTACGATATCGAAGTTGTTCAGAAATTCGAGAGAGGCGTTAAAGATGGCATCTACTACATTACCTTGCTTTGTGCATCTATTGCACCTAGCACTTCTAACTTCAACGACAGGAAGTTCTCTCAAAACGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTGTTGCTGACCCTGTTGCTGCGATTTCCGTCGCTGACAACGAAACTATCGGTCTTGTAAATGCAACTGATGGTGCTAACCCTACACCCAACAAAGATCCCAAACTGTCTATTACTAAAGAAGCGATTAAGTTCCTTCTGACTGATACTGGTTGGACACAACCAGGTACAACACCCAACTATGACTCTGTTAATGGAAGACTATCTAATGTCGAACTAACTGCACGTGCTGGAAATGAAGAAACTAGGAAGATCAACATCCGCGAAAACAATGATGGGACTGTCGCACCTATCAATGTTGAGTTCAGGAGGCACTCGATCCTTAGATCTGGTAACCATACGTTTGAGTATCTTGGTTTCGGTCCTGGTAACTATTCAACTGCATTCCCTCAAACTCAGGTAGAAACTCTGAGTGCAGATCAGGTTAAGTTCTCTCAGTCGATTAAAGAAGAAGCAGGTGTTGCATTCTACTCTGGTCTGAACTCTAACGGTGACCTGTTTATTGGTAACCAGATTATCAACCCTGTTACAGGTCAGATTACTAATGAAGATATTGCACAGTTGAATGTTGTTGGTGAAGAAAACACTACGATTCAGACATTCTCTGAGTTGGTTCTTACCGACAAACTGACCGTTATTGGTGGTGCATCTAACCAGTTAGAATCTATCTTTGCTGGTCCTGTTACATTCCAAGCACAAACATCCTTTACTAATAATCTTACTGCCAAAAAGATTACTTATAACAACCAGGATGGTACGGTAATCAAGCAAACGTTACTCGCTCCCGCCGATGCAAATGGACAACCAAGTTTTGCTGCTATCACAGGATACGATACACCTGGTAATGGTGATCTTGTTTACAATATCAATTGGACACCTGGGCAGTCGCTTGGTTGGATTTATTACAATGGAACGTGGCACGAGTTTGGTCTCACGGATACTGGTGACATTAATATCGATACTTTCAATAATGAGCAACATATCGGTATTGGTACTGCTGCTGTATCTAATTTCCGTGTTGGCATCCTCGGAAGCGCCAAAGTAGATGGTGACCTTGTTGTTACTGGACGAGGTGGTGTTGGTGCTGATAAGTATGTCACTAAGACATATACTGGTGACGGCACAACTCTGACATTTGCAGTTACTACCTATAGTGGTGGTATTCAGCATTCTGATGATTCACTGCTGGTATTCCTGAACGGTGTTGCACAGATTGCAGGTACAAACTACACAGTTGACGCTAACGGTGCAAACGTTGTATTCAGTTCTGGTGATGCACCACAATCTACAGATACAGTCCACATTTTAGAACTGCCTATCTAA

Genome Context

Tertiary structure

AOO03543.1
ESMFold structure
Source ESMFold
pLDDT 36.7
Oligomeric state monomer
Download structure