Phage RBP Database

Genbank accession

AYP28532.1 [GenBank]

Protein name

major tail protein

RBP type

TF

Evidence RBPdetect

Probability 0,82

Protein sequence

MADRKLTHFKFFYNTPLTDYQNTIHFSSNNERDNYFLNENHFNAIDYKNIPFNFIRDRNMVNLEQMSWQDAQGINYCTFKSDFENRRYYAFVNQIEYVNDHVTRMYLVIDTVMTYTQGNVLSQVQNAFVERQHLPREVYNYLLPSLRNNDDVIKASNKYYLNNYLEQFGGNLVLFQSSADLSKKFGTKKEPNLESSKGITYDYITSPVNLYVMNRKDFNEFMDKMSKYPWITQNFQKIILIPATFINIDDLESVKTQEDIKGLMTLKNEKLSNEWELKELRVPFERLQYMINANQDELKHLVRNEYLTIEIYSWNGDSLLLDAGKITEKTGVKLRTKSIIGYHNEVRIYPVDYNSAPNEKPIKASDNSILIDTGSFLNTAITFDSFAEVPILIDNGLLAQSQQANKQKNAQSNLISNRINNVVGGNDLKSRFYDAVSIGSNLSPTALFSKFNDEYNYYKELRAEYKDLALQPPTVTSSEMGNAFQIANSINGLTMKIGVPAPFDMDNIKRYYFMLGFETNDQAGTPFPIDSWTVCNYLRMRGTYTIDGIDPMLLEQLKVLLETGVRFWHNDGTNNPMAQNVFKNKFRK

Physico‐chemical properties

protein length:	588 AA
molecular weight:	68359,37570 Da
isoelectric point:	5,88843
aromaticity:	0,12585
hydropathy:	-0,52160

Domain architecture

AYP28532.1

1 588 aa

TAS 5–118 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR031772
TAS

IPR031772

IPR031772
TAS

IPR031772

AYP28532.1

1588 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0080
STR

DC_0080

AYP28532.1

1588 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR031772	TAS	DC_0461	5	118	InterPro cluster	Tail knob protein gp9, N-terminal	N-terminal	High	Text match	94 proteins / 94 hits
IPR031772	TAS	DC_0461	5	115	InterPro cluster	Tail knob protein gp9, N-terminal	N-terminal	High	Text match	94 proteins / 94 hits

Proteins with similar domain architecture

Phage

Staphylococcus phage JBug18 [NCBI] · taxon 2483712

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Staphylococcus epidermidis [NCBI] · taxon 1282

cellular organisms Bacteria Bacillati Bacillota Bacilli Bacillales

Genbank protein accession

AYP28532.1 [NCBI]

Genbank nucleotide accession

MH972263 [NCBI]

CDS location

range 9244 -> 11010
strand -

CDS

ATGGCAGATAGAAAACTGACACATTTTAAATTTTTCTATAATACACCACTGACAGATTATCAAAACACAATTCACTTTTCATCAAACAATGAACGTGACAACTATTTTTTAAATGAAAATCATTTTAATGCGATTGATTATAAAAATATTCCTTTTAATTTTATACGTGATAGAAACATGGTGAATCTTGAACAAATGTCATGGCAAGACGCACAGGGGATTAATTACTGTACGTTTAAATCTGATTTTGAAAATAGACGTTATTATGCGTTTGTGAATCAAATTGAGTATGTCAACGACCATGTGACACGAATGTATTTAGTCATTGATACAGTGATGACTTACACACAGGGTAATGTATTATCTCAAGTACAAAATGCTTTTGTTGAACGTCAACACCTGCCACGTGAGGTCTATAATTATTTGTTACCGTCACTGAGAAATAATGATGATGTTATTAAAGCCAGTAACAAATACTATTTAAATAATTATCTTGAACAGTTTGGTGGTAATCTTGTTTTATTCCAATCAAGTGCTGATTTATCTAAAAAGTTTGGGACTAAAAAAGAACCAAACTTAGAATCTTCAAAAGGGATTACGTATGATTACATTACAAGTCCAGTGAATCTGTATGTGATGAATCGTAAAGACTTTAACGAATTTATGGATAAAATGAGTAAATATCCATGGATTACGCAAAACTTTCAAAAAATTATTTTAATACCTGCTACATTTATTAATATTGATGATTTAGAATCAGTAAAAACGCAAGAAGATATTAAAGGATTAATGACACTTAAAAATGAAAAGTTATCGAATGAATGGGAATTAAAAGAATTACGTGTGCCTTTTGAAAGATTACAATATATGATTAATGCTAATCAAGATGAATTAAAACATCTTGTAAGAAATGAATATTTAACAATTGAAATTTATTCATGGAATGGTGACAGTTTATTACTTGACGCAGGAAAAATTACAGAAAAAACAGGGGTTAAGTTAAGAACAAAATCTATTATTGGTTATCATAATGAGGTACGTATTTATCCCGTTGACTATAATAGTGCACCTAATGAAAAACCAATCAAAGCAAGTGATAATTCAATATTAATAGATACAGGTTCATTCTTAAATACTGCTATTACATTTGATAGCTTTGCTGAAGTACCTATTTTGATTGATAATGGATTACTTGCTCAATCACAACAAGCTAATAAACAAAAAAATGCACAAAGTAATTTAATTTCAAATAGAATCAATAATGTTGTGGGTGGTAATGATTTAAAATCAAGATTTTATGATGCTGTAAGCATTGGATCAAATCTTTCACCAACGGCATTATTTTCAAAATTTAATGATGAATATAATTACTATAAAGAATTAAGAGCAGAATATAAGGATTTAGCATTACAACCACCAACAGTAACAAGTTCAGAAATGGGAAATGCGTTCCAAATCGCAAATAGTATTAATGGATTAACAATGAAAATTGGTGTACCCGCGCCCTTCGACATGGATAATATTAAACGTTATTATTTCATGTTAGGTTTTGAAACGAACGACCAAGCAGGAACACCATTCCCAATTGATTCATGGACGGTATGCAATTATTTAAGAATGAGAGGGACATATACCATTGACGGAATTGACCCTATGCTTTTAGAACAATTAAAAGTATTACTTGAAACGGGTGTAAGATTTTGGCACAACGACGGAACGAACAATCCAATGGCACAAAATGTATTTAAAAATAAATTTAGAAAGTAG

Title	Authors	Date	PMID	Source
Genome sequences of Staphylococcus podophages JBug18, Pike, Pontiff, and Pabna	Kriznik,J., Hernandez,A. and Hatoum-Aslan,A.	—	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature