Protein

View in Explore
Genbank accession
YP_009615730.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,59
Protein sequence
MAVVGIPGNIGSSAKAETGQAWMSAAAVQLRLPGSAVWMSQFAGRSKEEIWEWGGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYADIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGGFRVGHTEAGGGGGRPLGAGGVSSLNLNGDNATLGAPGRGYQLGTGYAGNGGDVGNPGSASSEGAGGGAAGRAVVGTSPQWINVGNIAGSWL
Physico‐chemical
properties
protein length:251 AA
molecular weight: 25260,63080 Da
isoelectric point:6,90221
aromaticity:0,08367
hydropathy:-0,19004

Domains

View on InterPro
Domain architecture
YP_009615730.1
1 251 aa
ATT 1–43 · RBD 48–251
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Salmonella phage Melville [NCBI] · taxon 2041413
Uroviricota Caudoviricetes Pantevenvirales Tevenvirinae Gelderlandvirus
Host
Salmonella enterica subsp. enterica serovar Newport [NCBI] · taxon 108619
Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Salmonella

Coding sequence (CDS)

Genbank protein accession
YP_009615730.1 [NCBI]
Genbank nucleotide accession
NC_042044.1 [NCBI]
CDS location
range 150700 -> 151455
strand +
CDS
ATGGCAGTAGTAGGAATTCCAGGAAATATAGGGTCATCCGCTAAAGCAGAAACTGGTCAAGCATGGATGTCTGCGGCAGCAGTACAATTAAGATTACCAGGATCAGCGGTATGGATGTCGCAATTTGCTGGTCGTTCCAAAGAAGAAATTTGGGAATGGGGCGGAGAAAATCACAGTTTCAACAAAGATTGGTTAATAGGCGAACTTCGCAATAGAGGTGGTACTCCTGTAGTAATTAATATAAGAGCTCATCAAGTGTCTTATACTCCAGGCGCACCTTTATTTGAATTTCCCGGAGACCTTCCAAATGCATATATTACACTTAACATTTATGCAGATATATATGGAAGAGGTGGTACTGGTGGAGTTGCTTATTTAGGCGGAAACCCCGGCGGAGACTGTATTCATAATTGGATTGGAAACAGACTTAGAATAAACAACCAAGGCTGGATTTGTGGTGGCGGAGGCGGCGGGGGTGGCTTTCGTGTTGGACATACTGAAGCTGGTGGTGGTGGCGGGCGACCTTTGGGAGCTGGTGGCGTTTCAAGCTTAAATCTAAACGGAGACAATGCTACTTTGGGTGCTCCCGGGCGAGGATATCAACTCGGAACCGGATATGCAGGTAACGGCGGGGATGTTGGTAACCCAGGTTCAGCCAGTTCAGAAGGAGCAGGCGGAGGCGCAGCAGGACGAGCTGTTGTAGGAACTTCTCCTCAATGGATAAATGTTGGTAATATTGCTGGCTCTTGGTTATAA

Genome Context

Tertiary structure

YP_009615730.1
ESMFold structure
Source ESMFold
pLDDT 84.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The complete genome of Salmonella phage Melville Zhang,K., Xie,Y., Liu,M. and Gill,J. 2019-04-25 — GenBank