Protein

View in Explore
Genbank accession
YP_009615730.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,59
Seq2Symm
C1 confidence 0,820
C1 0,820
C2 0,032
C3 0,000
Predicted homo-oligomer symmetry (Seq2Symm, per-class probabilities; C1 = monomer, C2 = dimer, C3 = trimer).
Protein sequence
MAVVGIPGNIGSSAKAETGQAWMSAAAVQLRLPGSAVWMSQFAGRSKEEIWEWGGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYADIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGGFRVGHTEAGGGGGRPLGAGGVSSLNLNGDNATLGAPGRGYQLGTGYAGNGGDVGNPGSASSEGAGGGAAGRAVVGTSPQWINVGNIAGSWL
Physico‐chemical
properties
protein length:251 AA
molecular weight: 25260,63080 Da
isoelectric point:6,90221
aromaticity:0,08367
hydropathy:-0,19004

Domains

View on InterPro
Domain architecture
YP_009615730.1
1 251 aa
ATT 1–43 · RBD 48–251
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Salmonella phage Melville [NCBI] · taxon 2041413
Uroviricota Caudoviricetes Pantevenvirales Tevenvirinae Gelderlandvirus
Host
Salmonella enterica subsp. enterica serovar Newport [NCBI] · taxon 108619
Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Salmonella

Coding sequence (CDS)

Genbank protein accession
YP_009615730.1 [NCBI]
Genbank nucleotide accession
NC_042044.1 [NCBI]
CDS location
range 150700 -> 151455
strand +
CDS
ATGGCAGTAGTAGGAATTCCAGGAAATATAGGGTCATCCGCTAAAGCAGAAACTGGTCAAGCATGGATGTCTGCGGCAGCAGTACAATTAAGATTACCAGGATCAGCGGTATGGATGTCGCAATTTGCTGGTCGTTCCAAAGAAGAAATTTGGGAATGGGGCGGAGAAAATCACAGTTTCAACAAAGATTGGTTAATAGGCGAACTTCGCAATAGAGGTGGTACTCCTGTAGTAATTAATATAAGAGCTCATCAAGTGTCTTATACTCCAGGCGCACCTTTATTTGAATTTCCCGGAGACCTTCCAAATGCATATATTACACTTAACATTTATGCAGATATATATGGAAGAGGTGGTACTGGTGGAGTTGCTTATTTAGGCGGAAACCCCGGCGGAGACTGTATTCATAATTGGATTGGAAACAGACTTAGAATAAACAACCAAGGCTGGATTTGTGGTGGCGGAGGCGGCGGGGGTGGCTTTCGTGTTGGACATACTGAAGCTGGTGGTGGTGGCGGGCGACCTTTGGGAGCTGGTGGCGTTTCAAGCTTAAATCTAAACGGAGACAATGCTACTTTGGGTGCTCCCGGGCGAGGATATCAACTCGGAACCGGATATGCAGGTAACGGCGGGGATGTTGGTAACCCAGGTTCAGCCAGTTCAGAAGGAGCAGGCGGAGGCGCAGCAGGACGAGCTGTTGTAGGAACTTCTCCTCAATGGATAAATGTTGGTAATATTGCTGGCTCTTGGTTATAA

Genome Context

Tertiary structure

YP_009615730.1
ESMFold structure
Source ESMFold
pLDDT 84.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The complete genome of Salmonella phage Melville Zhang,K., Xie,Y., Liu,M. and Gill,J. 2019-04-25 — GenBank