Protein

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Genbank accession
YP_009615730.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MAVVGIPGNIGSSAKAETGQAWMSAAAVQLRLPGSAVWMSQFAGRSKEEIWEWGGENHSFNKDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYADIYGRGGTGGVAYLGGNPGGDCIHNWIGNRLRINNQGWICGGGGGGGGFRVGHTEAGGGGGRPLGAGGVSSLNLNGDNATLGAPGRGYQLGTGYAGNGGDVGNPGSASSEGAGGGAAGRAVVGTSPQWINVGNIAGSWL
Physico‐chemical
properties
protein length:251 AA
molecular weight: 25260,63080 Da
isoelectric point:6,90221
aromaticity:0,08367
hydropathy:-0,19004

Domains

Domains [InterPro]
IPR048291
ATT
1–43
IPR048291 IPR007932
DC_1679
STR
6–185
DC_1679
YP_009615730.1
1 251
Architecture
ATT
STR
RBD
ATT 1-43 | STR 44-185 | RBD 186-251
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Melville
[NCBI] 		2041413 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Gelderlandvirus
Host Salmonella enterica subsp. enterica serovar Newport
[NCBI] 		108619 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009615730.1 [NCBI]
Genbank nucleotide accession
NC_042044.1 [NCBI]
CDS location
range 150700 -> 151455
strand +
CDS
ATGGCAGTAGTAGGAATTCCAGGAAATATAGGGTCATCCGCTAAAGCAGAAACTGGTCAAGCATGGATGTCTGCGGCAGCAGTACAATTAAGATTACCAGGATCAGCGGTATGGATGTCGCAATTTGCTGGTCGTTCCAAAGAAGAAATTTGGGAATGGGGCGGAGAAAATCACAGTTTCAACAAAGATTGGTTAATAGGCGAACTTCGCAATAGAGGTGGTACTCCTGTAGTAATTAATATAAGAGCTCATCAAGTGTCTTATACTCCAGGCGCACCTTTATTTGAATTTCCCGGAGACCTTCCAAATGCATATATTACACTTAACATTTATGCAGATATATATGGAAGAGGTGGTACTGGTGGAGTTGCTTATTTAGGCGGAAACCCCGGCGGAGACTGTATTCATAATTGGATTGGAAACAGACTTAGAATAAACAACCAAGGCTGGATTTGTGGTGGCGGAGGCGGCGGGGGTGGCTTTCGTGTTGGACATACTGAAGCTGGTGGTGGTGGCGGGCGACCTTTGGGAGCTGGTGGCGTTTCAAGCTTAAATCTAAACGGAGACAATGCTACTTTGGGTGCTCCCGGGCGAGGATATCAACTCGGAACCGGATATGCAGGTAACGGCGGGGATGTTGGTAACCCAGGTTCAGCCAGTTCAGAAGGAGCAGGCGGAGGCGCAGCAGGACGAGCTGTTGTAGGAACTTCTCCTCAATGGATAAATGTTGGTAATATTGCTGGCTCTTGGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1e2b4befcf217256f16d8e9ef1ba252aced9c6eb0e4422da4489d1207d720c76
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8425
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Salmonella phage Melville Zhang,K., Xie,Y., Liu,M. and Gill,J. 2019-04-25 — GenBank