Protein

View in Explore
Genbank accession
QFR57409.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MISNNAPAKMVLNSVVTGYTLAYIQHSIYSDYDVIGRSFWLKEGSNITRRDFTGVDTFSVTINNLKPTATYEVQGAFYDSIIDSELLNAQIGINLSDKQTFKMKSAPRITSARCESEPVDVGVGAPIVYLNTTGEADYCTIELKNNSNANNPWVKYYVGALMPTIMFGGVPVGPYKVRISGQVSLPDGVTIDSSGYYEYPTVFEVKYNFVAPTAPVNIVFKAARIADGKERYDLRVQWDWNRGTGANVREFVLSYIDSAEFAKTGWTKAQKINVGAAQSATIISFPWKVEHKFKVSSIAWGPNTQDTTDSTAQTFILNEDTPLDNNFVNETGIEVNYAYIKGKIKDGTTWKQTFLIDAATGAVNIGLLDEEGKAPISFDPIKKIVNVDGSVITKTINAANFVMTNLTGQDNPAIYTQGKTWGDAKSGIWMGMDNTNAKPKLDIGNATQYIRYDGDTLRISDKVVIGTPNGDVDLGTGMQGKQTVFVYKLAYSLPAKPLEQDYPPPGWSKTPPNRTDMTQNIYVTTGTLDPVTNKLLVGTSWSDVVQWSGTEGTIGHDGQRGPGMYSLGISGLGGWNDSQANAFFQNNFGSPPVKYDVLTEFNSSAPQSAFTRQWNGSSWADPAMVLHGNMIVNGTVTASKIVANDAFLSQIGVNVIYDRNAALSNNPEASYRMKIDLATGYIHIR
Physico‐chemical
properties
protein length:685 AA
molecular weight: 74904,27240 Da
isoelectric point:5,40439
aromaticity:0,10511
hydropathy:-0,26891

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
104–196
IPR057551
QFR57409.1
1 685
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 212-335 | STR 350-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QFR57409.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 410 410 0,8863
Central domain 411 650 241 0,1536
C-terminal 651 685 34 0,8829
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-410
Central
411-650
C-terminal
651-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage AmPh_EK80
[NCBI] 		2653643 Uroviricota > Caudoviricetes > Demerecviridae > Sugarlandvirus AmPhEK80 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFR57409.1 [NCBI]
Genbank nucleotide accession
MN434094.1 [NCBI]
CDS location
range 86635 -> 88692
strand -
CDS
ATGATTTCAAATAATGCACCAGCTAAAATGGTCCTAAATAGCGTCGTAACTGGATATACATTGGCGTATATCCAGCACTCTATCTACTCTGATTACGATGTTATAGGCAGATCTTTTTGGCTTAAAGAAGGTAGTAACATTACTCGTAGAGATTTTACTGGAGTTGATACTTTCTCTGTAACTATCAATAATCTAAAACCTACAGCAACTTATGAGGTTCAGGGTGCATTTTATGATTCTATAATAGACTCTGAACTACTTAATGCTCAGATAGGTATTAATCTGTCTGACAAACAAACTTTTAAAATGAAGTCAGCACCTAGAATCACGAGTGCTAGATGTGAATCAGAGCCGGTAGACGTAGGTGTTGGGGCACCAATAGTTTATCTAAATACTACGGGAGAAGCTGATTATTGTACTATAGAATTAAAAAATAATTCTAATGCTAATAATCCGTGGGTTAAATATTATGTTGGGGCATTAATGCCAACTATTATGTTTGGTGGTGTGCCAGTTGGGCCCTATAAGGTAAGAATTTCTGGACAAGTATCTCTACCAGATGGGGTAACTATTGATTCATCTGGCTACTATGAGTACCCTACTGTTTTTGAAGTTAAATATAACTTTGTAGCACCTACAGCTCCAGTTAATATTGTATTTAAAGCTGCGCGTATAGCCGATGGTAAAGAACGCTATGATTTACGTGTACAATGGGATTGGAATAGAGGCACAGGTGCTAACGTTCGTGAATTCGTTCTATCCTATATAGATTCAGCAGAATTTGCTAAAACTGGATGGACTAAGGCACAAAAAATCAACGTGGGGGCTGCTCAGTCGGCAACAATTATATCATTCCCCTGGAAGGTAGAACATAAATTTAAGGTGTCATCTATTGCTTGGGGACCAAATACACAGGATACTACTGATTCCACAGCACAGACATTTATACTAAATGAAGATACCCCACTTGATAATAATTTTGTTAACGAAACGGGTATAGAAGTTAACTACGCGTACATTAAGGGTAAGATCAAAGATGGCACAACCTGGAAACAAACCTTCCTAATAGATGCCGCCACTGGTGCTGTTAATATAGGTCTTTTAGACGAGGAAGGAAAAGCGCCAATATCTTTTGATCCTATTAAAAAGATTGTTAACGTTGATGGTAGTGTAATCACTAAAACTATTAATGCTGCTAATTTTGTCATGACTAACCTAACTGGTCAAGATAACCCGGCAATATATACACAAGGTAAAACTTGGGGAGATGCAAAGTCTGGTATTTGGATGGGTATGGATAATACCAATGCTAAACCAAAATTAGACATCGGTAACGCTACACAGTATATACGTTACGATGGTGATACATTGAGAATCTCTGATAAAGTTGTAATTGGTACACCAAATGGCGATGTAGATCTTGGTACAGGTATGCAAGGTAAACAAACAGTATTCGTTTATAAATTAGCATACTCACTTCCTGCAAAACCACTAGAGCAAGATTATCCACCACCGGGTTGGTCGAAGACCCCACCTAACCGTACGGATATGACTCAAAATATCTATGTGACTACAGGTACACTTGATCCAGTAACTAATAAATTACTTGTAGGTACTAGCTGGTCAGATGTAGTTCAGTGGAGTGGTACTGAAGGTACAATTGGACACGATGGACAACGTGGTCCTGGGATGTACTCTTTAGGTATTTCTGGTCTTGGGGGTTGGAATGACAGCCAGGCTAATGCCTTCTTTCAGAATAATTTTGGTAGTCCTCCAGTTAAATATGACGTGTTGACTGAGTTTAATAGTAGTGCTCCACAATCTGCATTTACTCGTCAATGGAATGGCTCCAGTTGGGCTGACCCTGCAATGGTTTTACACGGCAATATGATAGTTAACGGTACGGTAACCGCTAGTAAGATTGTGGCGAATGATGCCTTCTTATCTCAGATCGGTGTTAACGTTATCTATGATAGAAATGCAGCGTTATCAAACAACCCGGAAGCCTCTTACAGAATGAAGATAGACCTAGCTACTGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a123c6bb9495a9cf97e08502bb81f5f421234b7a54b879fe07c0deb9b15c0c9f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7778
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Klebsiella pneumoniae ST258 genomic variability and bacteriophage susceptibility Venturini,C., Ben Zakour,N., Bowring,B., Morales,S., Cole,R., Kovach,Z., Branston,S., Kettle,E., Thomson,N. and Iredell,J. 2019-05-05 — GenBank