Phage RBP Database

Genbank accession

QXL90289.1 [GenBank]

Protein name

tail fibers protein

RBP type

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,99

Protein sequence

MADLLPTVKISDLPNATESFEGDYLVVDQSDATRKSTWSDMFSRFGMMRLFSFQEGGTLVSPKDQVIDRSTNRIYQWTGAYPKLVPADSTPETTGGVGEGAWSANDPSLRGDLAGANGSTFIGGPAGTVAQSLDGFVTPAQFMGKYPTTTEAVTALAAYAKENKKAVLAWGWNLVLETSVYIDGVEWYGGSFNQTGGNRYMYLSNSTFRWVTFTGVCTRHYGGRLIITDSSWVNNTNTAAMLLQALPIEGTIDILDSDFRGCKYGILQQGTGALVTRARFARLNFNDLTGDAIECNVVQRHYKAGGLTIEDINIDNINNTDNSPNWGIGIGVAGQGPYGANASDDQYVSGIIIRNVKMRRVRQCIHFELCRDFKVENVEVYPDASVSNGTLLASGGVVCYGCKDYIIDGVRGEMVNGATRFIYFGWGVNQGTFAAPCRDFTLRNVRTHTGLVDIPVSAMDDWTNDVKVEDIECHTFKYRGLVSKLRLADIRCKQFDGIGDYEAGQGEAGGAMKRWAWCSAEIININSLDDNGVANGKFGQVGFDHLTTYGCNFDVVQHSKTNGNRGVILLNAGNIYISDNDDFPQGKEFVKGDIILKKTGGMFVVETGGSYIEPNDFIKATVVGSKTIECAADSSIRQPWATRAFKSAGLQLTIPGAGPGGADLQTTVIRAPYQKGAWITPFYLDIADPIQTATPDNTALVSTNPVVYSERT

Physico‐chemical properties

protein length:	712 AA
molecular weight:	77323,86160 Da
isoelectric point:	5,10649
aromaticity:	0,10112
hydropathy:	-0,20183

Domain architecture

QXL90289.1

1 712 aa

ATT 48–115 · STR 346–475 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:2.10.10.80
ATT

G3DSA:2.10.10.80 IPR011050

IPR040775
RBD

IPR040775

QXL90289.1

1712 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1918
ATT

DC_1918 DC_0045

QXL90289.1

1712 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	48	115	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits
IPR040775	RBD	DC_0821	52	103	InterPro cluster	Tail spike TSP1/Gp66, N-terminal domain	Central	High	Text match	1281 proteins / 1285 hits
IPR011050	STR	IPR011050	346	475	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QXL90289.1

1 712 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	147	147	0,9941
Central domain	148	579	433	0,9914
C-terminal	580	712	132	0,9733

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Salmonella phage NINP13076 [NCBI] · taxon 2849628

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Salmonella enterica [NCBI] · taxon 28901

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

QXL90289.1 [NCBI]

Genbank nucleotide accession

MZ326168.1 [NCBI]

CDS location

range 6894 -> 9032
strand -

CDS

ATGGCAGATCTATTACCTACCGTCAAGATTTCAGATTTACCGAATGCGACGGAATCTTTCGAGGGAGACTACCTGGTTGTTGACCAGTCGGATGCAACCCGTAAATCAACATGGTCAGATATGTTCTCCCGTTTCGGGATGATGCGCCTGTTTTCCTTCCAAGAAGGGGGGACGCTTGTCTCCCCCAAAGATCAGGTGATCGACAGATCAACCAACAGGATCTATCAATGGACAGGAGCATACCCGAAACTTGTTCCTGCCGACTCCACACCGGAGACTACCGGAGGTGTTGGTGAGGGTGCGTGGTCAGCTAACGACCCATCTTTACGTGGAGACCTTGCAGGTGCTAATGGATCAACCTTTATCGGTGGACCAGCGGGAACAGTGGCTCAATCACTCGATGGTTTTGTTACCCCTGCACAATTCATGGGGAAATACCCAACAACGACAGAGGCTGTAACAGCGTTAGCTGCATACGCAAAAGAGAACAAAAAAGCTGTTCTTGCATGGGGATGGAACCTTGTTCTTGAGACAAGTGTGTATATCGACGGTGTTGAATGGTATGGTGGGAGCTTTAACCAGACTGGCGGCAACAGATACATGTATTTGTCAAACAGCACATTCCGCTGGGTGACCTTCACAGGTGTTTGTACTCGTCATTATGGTGGACGTCTTATCATTACAGACTCCTCATGGGTTAACAATACCAACACCGCAGCGATGTTACTACAAGCCCTCCCTATAGAAGGTACAATTGACATTCTGGATAGTGATTTCAGAGGTTGTAAATATGGTATCCTTCAGCAAGGTACAGGCGCTCTTGTTACTCGCGCACGTTTTGCCCGTCTCAACTTTAATGATTTGACAGGCGATGCTATTGAGTGTAACGTTGTGCAGAGGCACTATAAAGCGGGTGGATTGACAATCGAAGATATTAACATCGACAACATCAACAATACAGATAACTCTCCTAACTGGGGTATTGGTATCGGTGTTGCGGGGCAGGGTCCATATGGTGCTAACGCCTCTGATGACCAATATGTTAGTGGGATCATCATTCGTAACGTTAAGATGCGTCGAGTTCGTCAATGTATCCACTTCGAGCTTTGCCGTGACTTTAAGGTAGAGAACGTTGAGGTTTATCCTGATGCATCTGTTTCTAACGGAACACTGCTGGCATCCGGTGGTGTCGTATGTTATGGCTGCAAAGACTATATCATTGATGGTGTTCGTGGCGAAATGGTCAACGGTGCTACCCGATTCATTTATTTTGGGTGGGGTGTTAACCAAGGCACCTTTGCTGCTCCGTGCCGTGACTTTACACTGCGAAATGTACGTACTCATACGGGACTGGTAGATATTCCAGTTAGTGCTATGGACGACTGGACCAACGATGTGAAGGTTGAGGACATTGAGTGCCACACTTTCAAATATCGCGGTCTTGTCTCAAAACTTCGTCTTGCCGACATCCGCTGTAAACAGTTTGATGGTATTGGCGACTATGAGGCTGGACAAGGTGAAGCAGGCGGGGCGATGAAGCGTTGGGCTTGGTGTTCTGCTGAGATCATTAATATCAATAGCCTTGATGATAATGGTGTCGCTAACGGTAAGTTCGGTCAGGTAGGCTTTGACCACTTAACAACATACGGTTGTAACTTCGATGTGGTTCAGCACTCAAAGACAAACGGAAACAGAGGTGTCATACTGCTTAATGCTGGTAACATCTATATCTCTGATAATGATGATTTTCCTCAAGGAAAGGAATTCGTTAAAGGGGACATCATTCTGAAGAAGACTGGTGGTATGTTTGTTGTTGAGACAGGGGGTTCTTACATTGAACCTAACGATTTCATCAAGGCAACTGTGGTTGGCTCAAAAACGATTGAGTGTGCAGCAGACTCAAGTATCCGACAACCTTGGGCTACTCGTGCATTTAAATCTGCTGGGTTGCAACTCACCATCCCAGGCGCAGGCCCCGGTGGTGCGGATCTCCAGACAACGGTTATAAGAGCGCCATATCAAAAAGGTGCTTGGATCACTCCGTTCTATCTGGACATTGCAGATCCAATCCAGACAGCCACACCTGATAACACGGCTCTTGTTTCGACAAATCCCGTAGTATACAGCGAAAGGACTTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)