Phage RBP Database

Genbank accession

CP062451.1|protein_5|CP062451.1_CDS_[2896..4134] [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,88

Protein sequence

MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLHLFMEDGSIFKNEPLIIDDVVKGFLTYKIPKKVIKHAGYVRCKLFLEKEEEKIHVANFSFNIVDSGIESAVAKEIDVKLVDDAITRILKDNATDLLSKDFKEKIDKDVISYIEKNESRFKGAKGDKGEPGQPGAKGDTGKKGEQGTPGKNGTVVSINPDTKMWQIDGKDTDIKAEPELLDKINIANVEGLENKLQEVEKIKDTTLNDSKTYTDSKIAELVDSAPESMNTLRELAEAIQNNSISESVLQQIGSKVSTEDFERFKQSLNSLYADKNHSHTIKQIEGLENALSKKSDINHSHDERYLLSSNAFTKEEADKLYQPIGSSQPSLNIWTGSETEYNYLYQKDPNTLYLIKG

Physico‐chemical properties

protein length:	412 AA
molecular weight:	46212,37110 Da
isoelectric point:	5,29912
aromaticity:	0,06553
hydropathy:	-0,68592

Domain architecture

CP062451.1|protein_5|CP062451.1_CDS_[2896..4134]

1 412 aa

ATT 4–141 · STR 178–230 · STR 327–356 · RBD 386–410 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR018913
ATT

IPR018913 G3DSA:1.20.5.320 Coil PF12789 IPR056923

G3DSA:2.60.40.3350
ATT

G3DSA:2.60.40.3350

CP062451.1|protein_5|CP062451.1_CDS_[2896..4134]

1412 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0885
STR

DC_0885

CP062451.1|protein_5|CP062451.1_CDS_[2896..4134]

1412 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR018913	ATT	DC_0557	4	141	InterPro cluster	BppU, N-terminal	Central	Medium	Text match	333 proteins / 333 hits
G3DSA:2.60.40.3350	ATT	G3DSA:2.60.40.3350	14	125	Merged direct domain	G3DSA:2.60.40.3350	N-terminal	Low	Positional only	41 proteins / 41 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	178	230	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
Coil	Unmapped	-	244	264	Coils	Coil	-	-	-	-
PF12789	STR	DC_0212	327	356	InterPro cluster	PF12789	C-terminal	Low	Positional only	31 proteins / 33 hits
IPR056923	RBD	DC_0181	386	410	InterPro cluster	Minor tail protein gp31, C-terminal	C-terminal	High	Text match	208 proteins / 208 hits

Proteins with similar domain architecture

Phage

Staphylococcus phage ECel-2020b [NCBI] · taxon 2777211

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)