Protein

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Genbank accession
AIX22150.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MARQGLLAQSKPAATTDTLLYSTSVDESASAVLKIANDGTGAAYRVAVRDYDQKLVLDASTYKLHKGDVITSYRVNVDTAFAASVFTPGQLLTSVDSEKTLKFESVFIPDLTTIFVKEAEIRDLSTESFTGTFAVGDTITKGTGSDTTTAVVFSASTDGEFLGIGPSTINGSGAEFTDGDEISSTSGGASTISVGGIGTGVDKFIFSNTSGGVYSKTVGDVFGDRTYRFDVADSSMSGRLFQLSTTEGGEFGPDLASGTADDGTEYVTGKTTNGTAGSSGAYVQFDFAVNATPPATLYYYDDTVAAYGGVDEAFSVSTSFTYDEFFAFDLSGTWSNTTDSFEVGGITYTIESQTAGPYGTVVDYTGTALKVILGVGSAEFAGSDTFSDVPKSNTADRTDVTVSSVTTAQAAIDTDTYIAVDSALSANAVDNVTSLVVGPGQRVHVYSATQNNVFSLIGFEDVSSEFTTRVFGQS
Physico‐chemical
properties
protein length:474 AA
molecular weight: 49328,05270 Da
isoelectric point:4,08942
aromaticity:0,10549
hydropathy:-0,03608

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014b
[NCBI] 		1493508 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX22150.1 [NCBI]
Genbank nucleotide accession
KJ019061 [NCBI]
CDS location
range 22844 -> 24268
strand +
CDS
ATGGCAAGACAAGGACTTCTCGCACAAAGCAAACCAGCAGCAACGACGGATACACTTTTGTATTCTACATCGGTGGATGAATCTGCATCGGCAGTGCTTAAAATTGCGAATGATGGTACAGGCGCAGCATACAGAGTTGCAGTTAGAGACTACGATCAAAAGTTAGTCCTTGATGCATCTACCTACAAACTTCACAAAGGCGATGTTATCACCAGTTATAGGGTGAATGTTGACACCGCATTTGCAGCATCAGTTTTTACCCCTGGTCAACTTTTGACCAGCGTTGATAGTGAAAAAACTTTGAAATTTGAGTCTGTTTTTATTCCAGATCTTACTACAATTTTTGTTAAAGAAGCGGAGATACGAGATCTCTCTACAGAATCTTTTACAGGAACATTTGCAGTAGGTGATACTATCACTAAGGGTACTGGTAGTGACACTACGACAGCAGTTGTATTTTCTGCCTCTACTGATGGTGAATTCTTAGGTATTGGACCTTCTACTATTAATGGAAGTGGTGCTGAATTTACTGATGGTGATGAAATAAGTAGCACTAGTGGTGGTGCTTCAACTATTTCTGTTGGTGGTATTGGTACTGGTGTAGATAAATTTATTTTCTCTAATACTTCTGGTGGAGTTTATAGCAAAACTGTTGGTGATGTTTTTGGTGACAGGACATACAGATTTGATGTCGCAGATAGTTCCATGAGTGGAAGATTGTTCCAACTTTCTACAACTGAAGGCGGTGAATTTGGTCCTGACCTTGCATCTGGCACTGCTGATGATGGTACTGAATATGTAACTGGTAAGACAACAAATGGCACCGCAGGTTCTAGTGGTGCATATGTTCAATTTGACTTTGCAGTAAATGCAACGCCACCCGCAACTTTATACTACTATGATGATACTGTAGCAGCATATGGTGGTGTTGATGAGGCATTTAGTGTGTCCACATCCTTCACTTACGATGAATTTTTTGCGTTTGACCTGAGTGGTACATGGTCAAATACTACAGATTCTTTTGAAGTTGGTGGTATTACTTATACTATCGAATCTCAAACAGCAGGTCCATATGGAACAGTTGTTGATTACACTGGAACTGCATTAAAAGTTATTCTTGGGGTAGGTTCTGCTGAATTTGCAGGTTCTGATACATTTTCTGATGTTCCTAAGAGTAATACAGCAGATAGGACTGATGTAACTGTAAGTTCTGTTACTACTGCACAGGCAGCGATCGATACTGATACTTATATTGCAGTTGATTCAGCGTTGTCTGCTAATGCAGTAGATAATGTGACATCATTGGTTGTCGGTCCTGGTCAAAGAGTACATGTTTACTCAGCAACTCAAAATAATGTATTCTCCTTAATTGGTTTTGAAGATGTGAGTTCCGAGTTTACAACTCGTGTATTCGGTCAGTCCTAA

Tertiary structure

PDB ID
005329bb08bdacb4cafc66c37e8435e98598fec7b895936cb9175b005c317b11
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5054
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank