Structure-Based Search
Find similar receptor-binding proteins by uploading a PDB structure file
Upload PDB File
How it works:
- Upload your protein structure in PDB format
- FoldSeek compares it against our database using structural alignment
- Results are ranked by combined score (TM-score + probability + coverage)
- Coverage shows how much of the structure aligns (filters out partial matches)
- Click on any result to view detailed protein information
Search Results
| Rank | Protein Name | Phage | Host | Type | Length (aa) | TM-Score | Coverage | Probability | Structure |
|---|
Structure Alignment Viewer
Your Query Structure Query
Structural Overlay Alignment
Blue: Query structure | Orange: Matched structureBright colors = aligned regions | Faded colors = non-aligned regions