Protein

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Genbank accession
QVJ12791.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MCGLVGFCATTNASDNEIALLKSLLAVDIIRGAHATGLAKIDPVKNEVGIHKRAVDAYDFLADPETKEFLDKGRARIYMGHNRYATMGDKTDHANAHPFQVDHITMVHNGTVDSWGLHLLDGNDKYNVDSNMLCATIANHGAKKTFEEKFSGAAAVIWWDSKERTLNFIRNDERPLFMAVTTTGTIVWASEPGMLKVFLERPNAKIRLRSPIAELKAEVLVTIPFTEAGVRKGAEPQTTPVTFLDLPIPESERQAAAWWGRYVGVSDYEDYSRSQGSQAGTKGSKAGSSYGTSGDAYARNTLRINNNLDAAGSTFKHRQLVTFDVVKVEAYANGSEYGTVTGIEREENLLIEAHGINVAKVHGYTVLRGSISNAYFIGQDRDLKVTVEDLAVSCLDPKHRPTPGETTPVLRIGTISSETKSHSKPRVQVGGTLGNTPPANISYPLKVQGHTFNNVHVFRDFVSQGCASCGKIPTAYDQRNRHLTVYEGAKFTGSLDECEFICGECVIENK
Physico‐chemical
properties
protein length:510 AA
molecular weight: 55842,25990 Da
isoelectric point:6,50451
aromaticity:0,08039
hydropathy:-0,33588

Domains

Domains [InterPro]
IPR029055
ATT
2–199
IPR029055 DC_0532
cd00352
STR
2–198
cd00352
IPR029055
ATT
2–238
IPR029055
IPR017932
STR
2–226
IPR017932
IPR029055
ATT
2–240
IPR029055
PF13522
STR
74–191
PF13522
QVJ12791.1
1 510
Architecture
ATT
STR
ATT 2-240 | STR 241-510
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVJ12791.1
1 510
Domain Start End Length (AA) Confidence
N-terminal 1 131 131 0,2069
Central domain 132 459 329 0,7058
C-terminal 460 510 50 0,7650
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-131
Central
132-459
C-terminal
460-510

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSA13
[NCBI] 		2833431 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ12791.1 [NCBI]
Genbank nucleotide accession
MZ089732 [NCBI]
CDS location
range 23145 -> 24677
strand +
CDS
ATGTGTGGATTGGTAGGCTTCTGTGCCACAACTAACGCGAGTGATAACGAAATCGCTCTTCTCAAATCCCTCCTGGCCGTGGATATTATCCGTGGTGCCCACGCCACTGGTCTGGCCAAGATCGACCCGGTTAAGAACGAGGTAGGAATTCACAAGCGGGCAGTAGATGCCTACGACTTCCTGGCTGATCCTGAAACCAAGGAGTTCCTGGATAAGGGTCGGGCTCGCATCTACATGGGACATAACCGTTACGCCACCATGGGTGACAAGACGGACCATGCGAACGCCCACCCCTTCCAGGTTGACCACATCACCATGGTACATAACGGGACTGTGGATTCCTGGGGTCTCCATCTGCTGGACGGCAATGATAAGTACAACGTGGACTCCAACATGCTGTGCGCTACCATTGCCAACCACGGCGCCAAGAAGACCTTCGAAGAGAAGTTCTCCGGTGCTGCTGCGGTAATCTGGTGGGACTCCAAGGAACGTACCCTGAACTTCATCCGCAACGATGAGCGTCCGTTGTTCATGGCGGTGACCACCACTGGTACCATCGTGTGGGCATCCGAGCCTGGTATGCTCAAGGTTTTCCTGGAGCGTCCCAACGCTAAGATCCGCCTTCGTTCTCCCATCGCTGAACTGAAGGCTGAAGTCCTGGTAACTATCCCGTTCACGGAGGCCGGAGTGAGAAAGGGTGCAGAACCCCAGACCACTCCGGTTACATTTCTCGACCTTCCCATCCCCGAAAGCGAAAGGCAAGCAGCGGCATGGTGGGGTCGCTACGTCGGTGTCTCCGACTACGAGGACTATAGCCGAAGCCAAGGCAGCCAAGCGGGAACGAAAGGCAGCAAAGCGGGCTCGTCGTATGGAACGTCTGGCGATGCGTACGCAAGGAACACCCTCCGGATCAACAACAATCTTGATGCAGCAGGTAGCACCTTCAAGCACCGGCAGCTCGTCACCTTCGATGTTGTCAAGGTCGAGGCCTACGCAAACGGCAGCGAGTACGGAACTGTCACTGGAATCGAGCGTGAAGAAAACCTTCTCATCGAAGCTCATGGCATCAATGTCGCCAAAGTCCACGGCTACACCGTCCTACGAGGAAGTATCTCCAACGCCTACTTCATCGGCCAAGACCGTGATCTCAAGGTTACTGTCGAGGATCTGGCGGTAAGTTGCCTGGACCCAAAGCATCGGCCGACTCCTGGGGAGACTACCCCAGTGTTGAGGATTGGAACGATCTCATCGGAGACGAAATCCCATTCTAAACCCAGGGTTCAAGTCGGCGGCACCTTGGGGAATACCCCTCCGGCCAACATCAGCTACCCCTTGAAGGTTCAGGGACACACGTTCAACAACGTTCATGTCTTTCGGGACTTCGTATCCCAAGGGTGTGCATCCTGCGGTAAGATCCCTACCGCGTATGACCAGCGTAATCGTCATCTGACGGTGTACGAGGGTGCCAAGTTCACAGGTAGCCTGGATGAGTGTGAGTTCATCTGCGGCGAATGCGTAATCGAAAATAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3aa943f4052713423a0ef7263cf02b4e663743c858b2844f22d0d5e0c8d41af1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5874
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages targeting P. aeruginosa isolated from hospital wastewater Nordstrom,H.R., Evans,D.R., Finney,A.G., Westbrook,K.J., Yassin,M.H., Doi,Y. and Van Tyne,D. 2021-07-09 — GenBank