Protein

View in Explore
Genbank accession
AXY86648.1 [GenBank]
Protein name
hemolysin-type calcium binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPLFPLGLETSESSNIKGFNNSGTIEHSPGAVMTFPEDTEVTGLPSSVRYNPDSDEFEGYYENGGWLSLGGGGIRWETLPHAPSSNLLEGRGYLINNTTGTSTVVLPSPTRIGDSVTICDAYGKFATYPLTVSPSGNNLYGSTEDMAITTDNVSATFTWSGPEQGWVITSGVGLGQGRVYSREIFTQILASETSAVTLNTPPTIVDVYADGKRLAESKYSLDGNVITFSPSLPASTELQVIEYTPIQLGNGGGSGSSTITWVYNGGSAIGGETEITLDIVVDDVPAIDINGSRQYKNLGFTFDPLTSKITLAQELDAEDEVVVIINGTPNIYNQIDYTLREVARVTNVKDTEVVYFSVGAVLSGYKVIYDKVTQRSYFIPELPTGTTAVSLSSSAVLVHSAGSVDLGALAVSREEYVTLSGTFDSGAVINVKNELLTHTDGKYRWDGALPKIVDAGSTPTTTGGVGLGAWVGVGDASLRSELNSTNGAGIVTTTSGYTVQETFDFIKNVQQANLHPFVPSGDFGFGLPFDSSLQVFKYNDEYYSYKGPIAPGSIVPANPSSDSNWKKEPVSDYIENYGGGVHVADQTPAILKAIAAGVRHIIFPKGELRMSQCDIPEYTQGLTFEGQGANQAYTGTTVIKPLSDNQNCLFNSGVNKHGQDSIKFKNIQFDGEWRCNHAILHESGAGWYYEKLTGKNFNTWVIYDDQGLTVMRDVYTEATSSDLTKRATGGCIRIYSDSVMDTVNCYGGSVPLWLAAGGNRITNIWANGGYDVGAIRLMPKNDSTNHINTAMSNIYIGESTNTSSTAIPVLDIRGNSIRRVSGVQISNAHFVHADLTLNTNVVMIRTDKVDGFVMSSFDVLGRGEYSSASSRTYNFLNATDSTGMAFSAGSVRGINNNPIVLSSGSRLAIDAVEFDGWSTNSDSGIENKAAIRSSGAGTRCCIGSSCAFNASQADAYAVYAGDEFAVDISILNLNYPSSNIIIPANTNYSYMYKRPGGKLTLVNTLTI
Physico‐chemical
properties
protein length:1013 AA
molecular weight: 108362,04580 Da
isoelectric point:4,74614
aromaticity:0,09279
hydropathy:-0,17098

Domains

Domains [InterPro]
DC_1946
ATT
1–687
DC_1946
G3DSA:3.30.2020.50
ATT
335–420
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
IPR040775
RBD
416–481
IPR040775
AXY86648.1
1 1013
Architecture
ATT
ATT 1-687 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXY86648.1
1 1013
Domain Start End Length (AA) Confidence
N-terminal 1 593 593 0,9960
Central domain 594 991 399 0,9893
C-terminal 992 1013 21 0,7207
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-593
Central
594-991
C-terminal
992-1013

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SenALZ1
[NCBI] 		2301647 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXY86648.1 [NCBI]
Genbank nucleotide accession
MH709121 [NCBI]
CDS location
range 47685 -> 50726
strand -
CDS
ATGGCCAACAAACCAACACAGCCTCTTTTCCCTTTGGGTTTAGAAACTTCTGAGTCTTCGAACATAAAAGGCTTCAACAACTCCGGCACTATTGAGCATTCCCCTGGTGCCGTAATGACATTTCCTGAAGATACTGAAGTTACAGGTCTTCCATCTTCTGTGCGTTACAATCCTGATAGTGATGAATTTGAAGGTTATTACGAAAACGGTGGTTGGTTGTCTTTGGGGGGTGGTGGAATACGCTGGGAAACGCTCCCTCACGCTCCCTCTAGCAATTTGTTAGAAGGTCGTGGCTATCTCATTAATAATACCACAGGGACATCTACAGTGGTTCTCCCTTCCCCTACGCGTATTGGGGATTCCGTTACTATTTGTGATGCTTATGGGAAATTTGCCACTTACCCATTGACCGTGTCTCCTTCTGGAAATAATTTGTATGGCTCCACTGAAGACATGGCTATAACAACTGATAACGTATCAGCAACGTTCACTTGGTCTGGACCTGAACAAGGTTGGGTTATCACATCCGGCGTCGGTCTTGGTCAAGGCCGTGTCTACAGTCGTGAAATCTTTACACAAATTTTGGCGTCTGAAACAAGTGCTGTTACTCTCAATACTCCACCAACAATCGTGGACGTGTATGCTGACGGAAAACGTCTTGCGGAATCCAAATATTCACTAGATGGAAATGTAATCACTTTCAGTCCTTCTTTGCCAGCCAGCACAGAACTTCAGGTGATTGAATATACTCCGATTCAATTGGGTAATGGCGGTGGTTCTGGTTCTTCTACGATTACCTGGGTCTATAATGGGGGTTCAGCGATTGGCGGTGAAACCGAAATCACGTTAGACATCGTTGTTGATGATGTTCCGGCCATTGATATAAACGGAAGTCGCCAGTATAAAAATCTGGGGTTCACATTCGATCCATTAACCAGTAAAATCACTCTTGCGCAAGAACTGGATGCAGAGGATGAAGTTGTTGTAATTATCAATGGAACGCCAAACATCTATAATCAAATTGATTATACTTTGCGGGAAGTGGCTCGTGTAACCAATGTTAAAGATACAGAGGTCGTTTATTTTAGTGTTGGTGCTGTGTTAAGTGGATATAAAGTTATCTATGATAAAGTAACACAGAGATCATATTTTATTCCAGAGCTACCGACTGGAACCACGGCAGTCAGCCTTAGTTCTTCGGCTGTGCTTGTGCATTCTGCTGGTAGTGTTGATCTGGGCGCATTAGCTGTATCTCGTGAAGAATACGTAACATTGTCTGGGACATTTGATTCTGGTGCTGTCATCAATGTTAAAAATGAATTACTCACCCACACGGATGGTAAGTATCGTTGGGATGGGGCATTACCTAAAATTGTAGATGCTGGCTCAACTCCTACAACAACTGGTGGCGTTGGTTTAGGTGCGTGGGTTGGTGTTGGTGATGCTTCTTTAAGATCCGAATTAAACTCAACAAATGGAGCGGGAATTGTAACAACAACTAGTGGTTACACTGTTCAGGAAACATTTGATTTTATAAAAAATGTTCAACAAGCAAATCTACATCCGTTTGTTCCTTCAGGCGATTTCGGTTTCGGGCTGCCTTTTGATTCTTCGTTACAGGTATTCAAGTATAATGATGAATATTATTCATACAAAGGACCTATTGCACCAGGGTCAATAGTACCAGCCAACCCTTCTTCAGATTCAAACTGGAAAAAGGAACCTGTTTCAGATTACATTGAAAATTATGGTGGTGGTGTCCATGTAGCTGATCAGACACCTGCAATCCTGAAAGCTATAGCGGCTGGAGTACGCCATATCATCTTTCCTAAAGGTGAACTTAGGATGTCTCAGTGTGATATACCTGAATATACACAAGGCCTTACTTTTGAAGGGCAAGGTGCTAACCAGGCGTACACCGGAACAACAGTAATCAAGCCGTTAAGTGATAATCAAAACTGCTTATTTAATTCTGGTGTAAATAAGCACGGACAGGATTCTATAAAATTTAAAAACATTCAATTTGACGGAGAATGGCGTTGCAATCATGCAATATTGCATGAGTCTGGAGCTGGTTGGTACTATGAAAAACTGACAGGTAAAAATTTCAATACATGGGTTATCTACGATGATCAGGGTTTGACTGTAATGCGTGACGTTTATACCGAAGCAACCAGTTCAGATCTGACGAAAAGAGCTACAGGTGGATGTATCCGTATATACTCAGATTCTGTAATGGATACCGTAAACTGTTATGGAGGAAGTGTTCCACTATGGCTTGCTGCTGGCGGAAACCGAATTACTAATATCTGGGCAAATGGTGGGTATGATGTTGGCGCAATACGTTTGATGCCAAAGAACGACAGTACTAACCATATCAACACCGCTATGAGCAACATCTATATTGGAGAAAGCACAAATACATCTTCAACCGCAATTCCAGTTCTTGACATACGTGGCAATTCAATTCGTCGAGTATCTGGTGTTCAGATTTCAAATGCCCATTTTGTGCATGCTGACTTGACTCTCAATACAAACGTGGTGATGATACGAACCGATAAAGTTGATGGTTTTGTGATGTCATCTTTTGATGTTCTTGGACGAGGCGAGTACAGTTCTGCAAGCAGTCGCACATATAATTTCTTAAATGCGACAGATTCTACCGGAATGGCTTTTTCTGCCGGAAGTGTAAGAGGTATTAATAATAACCCAATAGTTTTATCATCAGGGTCTAGGTTAGCTATTGATGCCGTTGAATTCGATGGGTGGAGTACGAACTCTGATTCAGGTATAGAGAATAAAGCTGCTATACGTTCATCTGGTGCTGGAACAAGGTGCTGTATTGGTAGCTCATGTGCTTTCAATGCTTCGCAAGCGGATGCTTACGCTGTGTATGCAGGGGATGAATTTGCAGTTGATATTTCTATTCTTAATCTTAACTATCCTAGTAGCAATATAATAATTCCTGCAAATACAAATTACAGTTACATGTATAAGCGACCAGGCGGAAAATTAACCTTAGTCAACACATTGACAATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
eed85258ec82975be6dcbb5767ad957e3a7e3603226215c64508db7e34acaee4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7198
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genomic analysis of two Salmonella enterica phages SeLz-1 and SeSz-3, new members of the Cba120virus genus(SeLz-1) Chen,L. 2019-03-08 — GenBank