Protein

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Genbank accession
XLL17450.1 [GenBank]
Protein name
tail sheath protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADNYDIPEFITQEVTIVTLDKEPGELNADTSVYLLEGESQPDSNYILSLKGANTELKRGDIIAFSDVLTDPRFRILSISDSTVNGDAFTNITYEGTEDSEAIVEATKGFPVYLVKSTKSACVEVPVENTEAKYDASEYELYDHTIGNFNTFDEDKLSKPFVYKDAKLKIFAKTPGVWGNKIDVAIAHPDDFNKGKYITDGIPLDSQFDYIPYGDQFAVIVMYANEIQESFIVSLGLTDKNEKNEFTYIETMINGKSSYILVSVNESVQGKPKTCLGEDLLKLSNGMDSTPGIDDIIDAYTIFDNKEEIDVDILICNETYPKAATDIAITRGDCIAFMGAPKSCSVGYKSTIANQKTLDFRKSLNIDSKYVTLCSNYKYQYCNELGGYRWVNLAADIAGLKAQTNYNQANWYAAAGLNRGLIKNCEALAYSPTGAMRDSNKMLLI
Physico‐chemical
properties
protein length:445 AA
molecular weight: 49367,86700 Da
isoelectric point:4,48973
aromaticity:0,10337
hydropathy:-0,28157

Domains

Domains [InterPro]
DC_1554
STR
139–269
DC_1554 G3DSA:3.40.50.11780
XLL17450.1
1 445
Architecture
STR
STR
STR 139-269 | STR 281-432 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLL17450.1
1 445
Domain Start End Length (AA) Confidence
N-terminal 1 55 55 0,8792
Central domain 56 254 200 0,5253
C-terminal 255 445 190 0,3284
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-55
Central
56-254
C-terminal
255-445

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CC_R7
[NCBI] 		3384961 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter coli
[NCBI] 		195 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLL17450.1 [NCBI]
Genbank nucleotide accession
PQ092953 [NCBI]
CDS location
range 52267 -> 53604
strand +
CDS
ATGGCGGATAACTACGATATACCAGAGTTTATAACTCAAGAAGTAACTATTGTTACTTTAGATAAAGAACCAGGTGAATTAAATGCAGACACTTCTGTATACCTACTAGAAGGTGAATCTCAACCAGATTCTAACTATATTTTAAGTCTTAAGGGTGCTAACACTGAATTAAAACGTGGTGATATTATAGCATTTTCTGATGTCTTAACTGATCCAAGATTCAGAATTTTATCAATTTCTGATAGTACAGTTAATGGTGATGCTTTCACGAATATTACTTATGAAGGAACAGAGGATTCTGAAGCTATAGTTGAAGCAACTAAAGGATTTCCAGTTTATTTAGTTAAATCTACTAAATCAGCTTGTGTTGAAGTTCCTGTAGAAAACACTGAAGCTAAATACGATGCATCAGAATACGAACTTTATGATCATACTATTGGCAACTTCAATACATTTGATGAAGATAAACTATCTAAACCATTTGTTTACAAAGATGCAAAATTAAAAATATTTGCTAAAACACCAGGTGTTTGGGGAAATAAAATTGATGTCGCAATCGCACATCCTGATGATTTTAACAAAGGAAAATACATCACTGATGGTATACCATTAGATTCACAATTTGATTATATTCCTTATGGTGATCAATTTGCTGTTATTGTTATGTATGCCAATGAGATTCAAGAATCATTTATTGTAAGCTTAGGCTTAACTGATAAAAATGAGAAAAATGAATTTACTTATATAGAAACAATGATTAATGGTAAATCAAGTTATATCTTAGTTTCTGTAAATGAATCAGTTCAAGGTAAACCAAAAACTTGTTTGGGTGAAGATTTACTTAAACTTTCAAATGGTATGGATTCAACTCCAGGTATTGACGATATTATAGACGCTTATACAATTTTTGACAACAAAGAAGAAATCGATGTTGATATCTTAATTTGTAACGAAACTTATCCAAAAGCAGCTACTGATATTGCGATTACTCGTGGTGACTGTATAGCATTTATGGGTGCACCAAAAAGTTGCTCAGTAGGTTATAAATCTACAATTGCTAATCAAAAAACACTTGATTTTAGAAAATCTTTAAATATAGATTCTAAATATGTAACATTGTGTAGCAATTACAAATATCAATACTGTAATGAGCTTGGCGGTTACAGATGGGTGAATCTAGCAGCAGATATTGCAGGTCTTAAAGCTCAAACAAATTATAACCAAGCTAACTGGTATGCAGCTGCGGGTCTTAATAGAGGACTTATCAAAAACTGCGAGGCGTTGGCATATAGCCCAACTGGCGCGATGCGTGATAGCAACAAAATGCTTTTAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c75e29c2f3a304bd43b6c6a2407f489b6edb392d51a70a792253829a1274b546
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6038
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50