Protein

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Genbank accession
AJA73204.1 [GenBank]
Protein name
defective tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MKQVMNPINTPTQRFKDGNPATGEYGTIVTAEFLNNVQDSVINTQQELHSVLAEAGIEANDEQVNQVAKAIKKIAGDATRDNFNALANPDGYKHIGRCKPVAELRTIRPTEHGQRILVDAYYEDGTTGGGEFVADLQDLVTPDDGGVCFVVNNNGGRWKRVDLSHLTLFDFWAVGDGVTNDESAFVNAMRYSQFFIENGTFRINNAVNSVRDNVKILGNKTGKLVLGAGIQQAGAEVFNINHSNYFISGFCIETPNKAIGIRFKSLDDAGVKNLHIDNVVFNGTFYGVRAGESIQADTNYPTDNVIVQNCQSYCGSGNAGHYLCTKVKGVRFFNNIAIGGRNVSAYGATSCSDIFIFGNREQGMAVTTVDVEAGVQVEDVQTGECVVANNIFRHDIWMSGAKNAIINSNLCRRLRVTSGNPTDTGSNNVEFSNNQAKSIAISKYGSFDNPSLFIDNINFINNILEPSEFNQDVYIDGTILKQCQFINNRCISKSKQYSVRLARNNPFLNLTFKSNKLSDNPAIISGKQGVIFCDDLSLGVNKHRLRLRFSSPINFTVNQEWQKMPFDRVLNDINGHVDIVSGQFIARTGGTFHLKGKITVTNSSEDVLNLYQLRLLINNEEKERLINQSVSPKNSKSNTNGMTTINFDTVVDLKVGDIVDLQYKTTHELTLLSDSFLSQIYVTQEF
Physico‐chemical
properties
protein length:686 AA
molecular weight: 75768,02190 Da
isoelectric point:5,90576
aromaticity:0,08746
hydropathy:-0,29461

Domains

Domains [InterPro]
DC_0282
STR
21–684
DC_0282
IPR011050
STR
169–522
IPR011050 IPR008983
IPR008983
RBD
556–665
IPR008983
AJA73204.1
1 686
Architecture
STR
STR 21-684 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AJA73204.1
1 686
Domain Start End Length (AA) Confidence
N-terminal 1 181 181 0,9921
Central domain 182 535 355 0,9875
C-terminal 536 686 150 0,9849
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-181
Central
182-535
C-terminal
536-686

Taxonomy

  Name Taxonomy ID Lineage
Phage Mannheimia phage vB_MhM_3927AP2
[NCBI] 		1572750 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mannheimia haemolytica
[NCBI] 		75985 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJA73204.1 [NCBI]
Genbank nucleotide accession
KP137440 [NCBI]
CDS location
range 31105 -> 33165
strand +
CDS
ATGAAACAAGTGATGAATCCGATTAATACCCCAACACAGCGTTTTAAAGATGGCAACCCTGCCACTGGTGAATATGGCACGATTGTGACTGCTGAATTTTTGAATAACGTCCAAGATTCGGTCATTAACACCCAACAAGAATTGCACAGTGTACTTGCTGAAGCAGGAATCGAAGCAAATGACGAACAAGTTAATCAGGTGGCTAAAGCAATCAAGAAAATTGCGGGCGATGCTACTCGTGATAATTTTAACGCATTAGCCAACCCTGATGGTTACAAACACATCGGTCGCTGCAAACCGGTTGCGGAGTTACGTACTATCCGCCCAACGGAACACGGTCAGCGTATTTTGGTGGATGCTTACTATGAGGACGGCACAACAGGCGGTGGGGAGTTTGTGGCTGATTTGCAGGATTTAGTTACGCCTGATGATGGTGGGGTTTGTTTTGTTGTGAATAATAATGGGGGGCGGTGGAAGCGTGTTGACCTTTCACATCTTACATTATTTGATTTTTGGGCCGTCGGTGACGGGGTAACAAATGATGAATCAGCATTTGTAAATGCTATGAGATATTCTCAATTTTTTATCGAAAACGGTACATTTCGTATCAACAATGCCGTTAATTCTGTTCGCGATAATGTGAAAATTTTGGGCAATAAGACCGGCAAATTAGTATTAGGTGCAGGTATCCAGCAAGCAGGGGCCGAAGTTTTTAATATTAATCACAGCAATTATTTTATCTCGGGTTTTTGTATTGAAACACCGAACAAAGCAATTGGTATTCGATTTAAGTCTTTGGATGATGCTGGTGTTAAAAATCTCCATATTGACAATGTTGTGTTTAATGGCACCTTCTACGGGGTCAGGGCAGGTGAAAGTATTCAGGCGGATACTAATTACCCAACTGATAATGTGATTGTACAAAACTGCCAATCGTATTGTGGTTCAGGTAATGCGGGACATTATCTCTGCACCAAAGTTAAAGGTGTGCGATTTTTTAACAATATAGCAATTGGAGGTCGCAATGTATCAGCTTACGGTGCAACATCTTGCTCTGATATTTTCATTTTTGGTAATCGTGAACAGGGGATGGCAGTGACGACAGTCGATGTGGAAGCGGGCGTACAAGTGGAAGATGTACAAACTGGCGAATGTGTGGTAGCGAATAATATTTTCAGACACGATATTTGGATGTCTGGTGCTAAAAATGCCATTATCAACAGTAACCTCTGCCGTCGCTTGCGTGTCACATCAGGTAATCCGACTGACACAGGCAGCAACAATGTAGAATTTTCAAATAATCAAGCAAAATCTATTGCAATATCGAAATATGGTTCTTTCGATAATCCTTCATTGTTTATTGATAATATCAATTTTATTAATAACATTTTGGAGCCCAGTGAATTTAATCAAGATGTGTATATTGACGGGACAATTTTAAAACAGTGCCAATTTATTAATAATCGTTGTATTAGCAAGTCTAAGCAATATTCTGTCAGACTTGCTCGCAATAATCCGTTCTTAAATTTAACATTTAAGAGTAATAAATTATCGGACAATCCTGCGATTATATCAGGTAAGCAAGGTGTTATTTTCTGCGATGATTTGAGCTTAGGAGTAAATAAGCACAGATTAAGATTGCGATTTTCATCGCCGATTAATTTTACTGTTAATCAAGAATGGCAAAAAATGCCGTTTGACAGAGTGTTAAATGATATCAATGGTCATGTTGATATTGTCAGTGGTCAATTTATTGCAAGGACAGGCGGGACTTTTCATTTAAAAGGTAAAATAACGGTTACAAATTCATCGGAAGATGTGCTGAATTTATATCAACTCAGGCTGTTAATAAATAACGAAGAGAAAGAAAGACTGATTAATCAAAGTGTTTCACCTAAAAACAGCAAATCAAATACAAATGGTATGACAACAATCAATTTTGATACTGTAGTTGATTTAAAAGTAGGTGACATTGTTGATTTGCAGTATAAAACAACGCATGAGTTGACATTACTGTCAGACTCATTTTTATCTCAAATTTATGTGACTCAGGAGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cc264db1175fe13b6edbfafacd1819c725e7227a3de0f08f8ccf7cf4560e383d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8340
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50