Protein

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Genbank accession
AFD22209.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,65
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
METFKQGELTARIDERGIDLGNINVNLYTMDNSTSVLDIHIKKRNIFSEEKEFIPVNLNQTTFKPVLHLIAEDGSIFTNEELEVVKAEEGHVRYNVSDYVTKHVGRVQAKLFLIDSSNLTDDSSHVADFYFKVNDSGITKAIGKEVHVDMLDDIVERIMLKDIERFRGPKGDKGDTGPQGPKGDKGADGINGEMGPAGPTGPMGPKGDTGEKGLQGEQGPPGPPGETPTLPDFTNWQKHKLTNDSGNQITNFYDGNPMTNDNLLSAKSGFYFNLKAQDSPSGATGYVFIQKNEGNGRKIYYSSYNRNDLYIKTYSESIGWIEWKNLSNDYIDTGWLPLPLINGTKQAGSDNQPKYRLVTINDTSMLFINGAISNISSKTMVFAKLPTNISQKISGYTQYTKASINSYINMMTIYNITLNLNGELKITLEPNSTVDSNSVYSIEGTITL
Physico‐chemical
properties
protein length:448 AA
molecular weight: 49565,87740 Da
isoelectric point:5,18806
aromaticity:0,08705
hydropathy:-0,54621

Domains

Domains [InterPro]
DC_0885
STR
1–427
DC_0885
IPR018913
ATT
8–158
IPR018913 IPR008160
G3DSA:2.60.40.3350
ATT
19–139
G3DSA:2.60.40.3350 PTHR24637
AFD22209.1
1 448
Architecture
ATT
STR
ATT 1-158 | STR 159-427 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFD22209.1
1 448
Domain Start End Length (AA) Confidence
N-terminal 1 323 323 0,9917
Central domain 324 437 115 0,0035
C-terminal 438 448 10 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-323
Central
324-437
C-terminal
438-448

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage StB27
[NCBI] 		1147044 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus hominis
[NCBI] 		1290 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFD22209.1 [NCBI]
Genbank nucleotide accession
JN700519.1 [NCBI]
CDS location
range 35999 -> 37345
strand +
CDS
ATGGAAACGTTCAAGCAAGGTGAATTAACTGCTCGTATAGATGAGCGAGGTATTGACTTAGGTAACATCAATGTCAATCTTTACACAATGGATAACTCTACTTCTGTGTTAGATATTCATATTAAAAAACGTAATATCTTTAGCGAAGAAAAAGAATTTATTCCAGTAAATCTAAATCAAACGACATTCAAACCAGTATTGCATCTAATTGCTGAAGATGGCTCTATTTTTACTAATGAGGAATTAGAAGTAGTGAAAGCAGAAGAAGGTCATGTGCGTTACAACGTATCTGACTATGTAACAAAGCACGTAGGACGTGTACAAGCAAAATTATTCTTAATTGATAGTAGCAATTTGACTGATGATAGTTCACATGTGGCAGATTTCTATTTCAAAGTAAATGATAGTGGTATCACAAAAGCAATCGGTAAAGAAGTTCATGTTGATATGTTAGATGATATCGTTGAACGAATTATGTTAAAAGACATTGAACGTTTCAGAGGTCCTAAAGGTGACAAAGGCGATACTGGTCCACAAGGGCCAAAAGGTGATAAAGGTGCAGATGGAATTAATGGTGAAATGGGTCCAGCAGGTCCAACAGGTCCTATGGGACCAAAAGGGGATACTGGAGAAAAAGGTCTACAAGGCGAACAAGGACCTCCAGGTCCACCAGGAGAAACACCTACTTTACCCGATTTTACAAATTGGCAAAAACATAAATTAACTAATGATAGTGGTAATCAAATAACTAATTTTTATGATGGTAATCCAATGACTAATGATAATCTTTTATCTGCAAAATCGGGATTTTATTTTAATCTAAAAGCTCAAGATTCTCCTAGTGGAGCTACGGGATATGTTTTTATACAAAAGAACGAAGGAAATGGTAGAAAAATATATTATTCTTCGTATAATCGTAACGATTTATATATTAAAACTTATTCAGAATCAATTGGTTGGATAGAATGGAAAAACTTGAGTAACGACTATATTGACACTGGGTGGCTTCCTCTTCCATTAATTAATGGAACAAAACAAGCTGGGTCGGACAACCAACCCAAATATAGACTTGTTACTATAAATGATACTAGCATGTTATTTATTAACGGAGCAATTAGTAATATCAGTTCAAAAACGATGGTGTTTGCAAAGTTACCAACGAACATTTCACAAAAAATAAGTGGGTATACACAATACACAAAAGCAAGTATAAACTCATATATTAATATGATGACCATTTATAATATAACTTTAAATTTAAATGGAGAGCTAAAAATAACCTTAGAACCCAATAGCACAGTAGATTCTAACAGTGTTTATTCTATCGAAGGAACAATAACATTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4f70e6bc3f9d7afd5d0439218a09a97d980c1e2e61decfeadabaa254207e4493
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8037
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50