Protein

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Genbank accession
XRX05611.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MSVLQKIIMGEPPGGSGGDNNRVAHTKTNENFGVVERSTPLDIGYFNDSMDLTPDDVGKRFGLWIANAGKAIGLPPASSVRPNSCIHLFNVQEKVSIKLQAGDLSQLTVLNTGDWAKYVSDGVKIWHVAERGKMMWDEVVGGKLTVGSDLFAATQNDEGHLVLGKMPGYFYGNSGSVGWWSSDAGGSYQYLLSDHTFRVNGEVVAVCDKGNALRFDWGKKTAGQLGATVDGKYLGYLWHSGNLAQPMTLDTPQYVGTKKTFTQAQEIAVGATGLHTQASLYLNGMGGLSYLGFSGLNNTVGAQFRISSNTSVAELQCVNYNATSFGVLTASNFNQASDRAFKSDIRTLENVMARLRGKRGVTYLQKNSPEAGRQAGVIANEWWDFPELLGEGPEIDEDGDFIVRQYDERGKEIFGETGPSKGRPSLTFRYTNAVGVLLAGLLETDAALQDALRRIAELEAAK
Physico‐chemical
properties
protein length:462 AA
molecular weight: 49963,45980 Da
isoelectric point:5,62032
aromaticity:0,09307
hydropathy:-0,28723

Domains

Domains [InterPro]
DC_0954
ATT
4–162
DC_0954 IPR030392
DC_0745
STR
153–385
DC_0745 DC_0869
IPR030392
CHP
337–384
IPR030392 Coil
XRX05611.1
1 462
Architecture
ATT
STR
RBD
ATT 4-162 | STR 163-385 | RBD 386-462
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRX05611.1
1 462
Domain Start End Length (AA) Confidence
N-terminal 1 129 129 0,7588
Central domain 130 328 200 0,1695
C-terminal 329 462 133 0,9984
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-129
Central
130-328
C-terminal
329-462

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage vB_RY5
[NCBI] 		3412857 Viruses >
Host Burkholderia sp.
[NCBI] 		36773 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX05611.1 [NCBI]
Genbank nucleotide accession
PV072764.1 [NCBI]
CDS location
range 13698 -> 15086
strand +
CDS
ATGTCGGTACTTCAAAAAATCATCATGGGCGAGCCGCCCGGCGGAAGCGGCGGCGACAACAACCGCGTCGCACACACCAAGACGAACGAGAATTTCGGTGTGGTCGAACGCTCGACCCCGCTCGATATCGGGTATTTCAACGATAGTATGGACCTGACGCCGGACGATGTCGGAAAACGGTTCGGGCTGTGGATCGCCAATGCGGGAAAGGCAATCGGGCTCCCGCCCGCGTCGTCGGTGCGGCCGAATTCCTGCATTCACCTGTTCAACGTACAGGAGAAGGTATCGATCAAGTTGCAGGCGGGTGATCTGTCTCAGTTGACCGTGCTGAATACCGGCGACTGGGCGAAGTACGTGTCTGACGGTGTGAAGATCTGGCACGTCGCCGAGCGCGGCAAGATGATGTGGGACGAGGTCGTCGGCGGCAAGCTGACCGTGGGTAGCGATCTCTTCGCGGCGACTCAGAACGACGAAGGGCACCTTGTGCTTGGCAAGATGCCTGGCTATTTCTACGGAAATAGCGGGTCGGTGGGGTGGTGGTCTTCGGACGCCGGAGGATCGTACCAATACCTACTCAGCGACCATACGTTTCGCGTCAACGGCGAAGTAGTCGCTGTGTGCGACAAGGGGAACGCCCTTCGGTTCGACTGGGGGAAGAAGACGGCTGGCCAGCTCGGGGCGACGGTCGACGGCAAATACCTCGGCTATCTCTGGCACAGCGGCAACCTTGCACAACCGATGACGCTTGATACGCCGCAATACGTCGGGACGAAGAAGACGTTCACGCAGGCGCAGGAAATCGCCGTCGGTGCAACAGGGCTTCATACGCAAGCGTCGCTGTACCTGAACGGAATGGGCGGTCTTAGCTACCTCGGATTTTCCGGGCTGAACAATACCGTCGGCGCGCAGTTTCGGATTTCCAGCAACACCTCGGTCGCAGAATTGCAGTGCGTCAACTACAACGCGACATCGTTCGGGGTGTTGACCGCTTCGAATTTCAACCAGGCGTCGGATCGCGCTTTCAAATCCGACATCAGGACACTCGAAAACGTAATGGCGCGGCTGCGCGGTAAGCGGGGCGTGACGTACTTGCAAAAAAACAGTCCGGAAGCGGGGCGACAGGCGGGTGTCATTGCGAACGAGTGGTGGGATTTCCCGGAACTGCTCGGCGAGGGACCGGAGATCGATGAGGACGGCGATTTCATCGTGCGTCAGTACGACGAGAGAGGCAAGGAAATTTTCGGCGAGACCGGGCCGTCGAAGGGGCGGCCGTCGCTGACCTTCCGTTACACGAATGCTGTCGGCGTGCTGTTGGCCGGCTTGCTCGAGACGGATGCGGCGTTACAGGACGCGCTCAGGCGGATTGCGGAATTGGAGGCGGCGAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b2dffc7dcc72ea52fe06184b09ac448f8d5fe6bdc38929ea27bc4569c65a3de5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7285
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50