Protein

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Genbank accession
AJT60706.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTIELDDVTSGYNVSVINGNFQTIEDKMNQEVLWRGASAVAGESKMERDLDMDGHRILNADLDGSTITNDRAVRVSTGYLPPIPQTLEERKGAVVSFDINTGDPIALAPASGSAVDVLNQLANNSDVTKGDALVALKQPFTGAIARTVHSKMADSVSAKDFATGDGVTDDYAKLMQAYQWAAAHGKSLFIPAGIYMFSQKLVFDTPGVFIFGEGMNSTSLRFTGTGTAIEFNDSIPNNGIYSFSGGIADLEVVGNANTTNIIYNKNVNHWYLSRVNAREASTINGVGLRVEGPTGCHIQHFVCSTNAQLMSSRPFVGIWMDAIITTGGRTAATTLLHPIIEGMTGDGVHLRGCDQLTWIGGTSENNGGNGVTFSDNGQPRINTLIGVGFEANLGFADIFDAGQMNRFINCTSTKLSYFGVTSLFAELSGGYHQSVLVEGNFTTLHDLKYSFFANGGTFVPKENTKYWNLFNTQTSAIVNLPKPGHLLALTGSPMLFTNTFGFPIDVMMHVDSAAVVSSVFFCEGTTPNVKVDATGGIRLDPGNSLQITYTGSPTFYWMPR
Physico‐chemical
properties
protein length:560 AA
molecular weight: 60124,87260 Da
isoelectric point:5,08643
aromaticity:0,09464
hydropathy:-0,05000

Domains

Domains [InterPro]
IPR012334
STR
114–375
IPR012334 DC_1620
IPR011050
STR
150–443
IPR011050
AJT60706.1
1 560
Architecture
STR
RBD
STR 114-443 | RBD 453-560
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AJT60706.1
1 560
Domain Start End Length (AA) Confidence
N-terminal 1 169 169 0,9707
Central domain 170 465 297 0,9878
C-terminal 466 560 94 0,9836
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-169
Central
170-465
C-terminal
466-560

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage CVT22
[NCBI] 		1622234 Uroviricota > Caudoviricetes > Zobellviridae > Citrovirus coptotermitis >
Host Citrobacter sp. TM1552
[NCBI] 		1676276 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Citrobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJT60706.1 [NCBI]
Genbank nucleotide accession
KP774835 [NCBI]
CDS location
range 555 -> 2237
strand +
CDS
ATGACAATTGAGCTTGATGATGTAACTTCTGGATACAACGTGTCTGTTATTAATGGCAACTTTCAGACAATTGAAGATAAGATGAATCAAGAAGTGTTATGGAGAGGAGCTTCAGCAGTAGCTGGAGAATCTAAGATGGAACGGGATTTAGATATGGATGGACACCGTATTCTAAATGCTGATTTAGATGGTTCTACAATTACCAACGATAGAGCTGTACGTGTTTCTACAGGATATCTCCCTCCTATTCCTCAGACATTAGAAGAGAGAAAAGGAGCTGTTGTCTCTTTTGATATTAACACAGGAGACCCAATTGCGTTAGCCCCTGCTAGTGGAAGTGCTGTAGATGTATTGAACCAATTAGCTAACAACTCAGATGTCACTAAAGGAGATGCGTTAGTTGCGTTAAAGCAACCATTCACTGGAGCTATTGCTCGAACTGTTCATAGCAAGATGGCTGACTCAGTTAGTGCTAAAGATTTTGCTACAGGTGATGGTGTTACAGATGACTACGCAAAACTAATGCAAGCCTATCAATGGGCAGCAGCACATGGGAAGAGTTTGTTTATTCCTGCTGGCATCTACATGTTCTCTCAGAAACTTGTATTTGACACCCCCGGTGTATTCATCTTCGGTGAAGGGATGAATAGCACCTCTCTGCGTTTCACAGGAACTGGTACAGCTATTGAGTTTAACGATTCTATTCCTAACAACGGAATTTATTCTTTCAGCGGAGGTATTGCTGATTTAGAAGTTGTAGGGAATGCCAACACTACAAACATCATCTATAACAAGAACGTAAACCATTGGTATCTCTCTCGCGTTAACGCTCGTGAAGCCTCTACAATTAATGGTGTAGGATTACGCGTTGAAGGGCCAACTGGGTGTCACATTCAACATTTCGTATGTTCTACGAATGCCCAGCTTATGTCTAGCCGTCCTTTTGTAGGTATTTGGATGGATGCCATCATCACTACAGGTGGTCGTACAGCAGCTACAACTCTTCTCCATCCAATCATTGAAGGGATGACAGGAGATGGTGTACATCTGCGTGGATGTGACCAGCTCACCTGGATTGGTGGTACTTCTGAGAATAACGGTGGTAATGGTGTAACATTCTCAGATAATGGACAGCCACGTATCAATACACTTATTGGTGTAGGGTTTGAAGCAAACTTAGGCTTTGCTGACATCTTTGATGCGGGACAAATGAACCGCTTCATAAACTGTACCTCTACCAAACTTAGTTACTTTGGCGTAACCTCTTTATTTGCTGAACTATCTGGCGGTTATCATCAGAGTGTTCTGGTAGAAGGTAACTTCACCACTCTGCATGATTTGAAATATTCCTTTTTTGCTAATGGTGGTACTTTCGTTCCTAAAGAAAACACTAAGTATTGGAATCTTTTCAACACCCAAACCAGTGCTATTGTAAACCTTCCTAAACCGGGACACCTGCTTGCTTTAACAGGAAGCCCTATGTTATTTACTAATACATTCGGATTCCCTATTGATGTGATGATGCATGTGGATAGTGCGGCTGTAGTGTCTTCCGTATTCTTCTGTGAAGGAACCACCCCTAACGTTAAAGTGGATGCAACAGGTGGTATTCGTCTTGACCCCGGTAACTCTTTACAAATAACATACACAGGTTCTCCTACGTTCTATTGGATGCCACGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
97d5af3f19be50bd540e0517673a0c1806621a91c1e1a6735233b3fa5b243748
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7876
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Citrobacter Phage CVT22 Isolated from the Gut of the Formosan Subterranean Termite, Coptotermes formosanus Shiraki Tikhe,C.V., Martin,T.M., Gissendanner,C.R. and Husseneder,C. 2015 26184927 GenBank