Protein

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Genbank accession
AYP69664.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGCSDVMSLNDLQIAKKHQIFEAEVITGKQGGVAGGADIDYATNPVTGQTQKTLPAVLRGAGFSPASFNFTTGGTLGVNDADKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLATGGISDSAWDAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFGGKTLTIDCKAKFIGDGNLVFTQLGKGSIVAAPFMESATTPWVIKPWTDNNEWITDPAAVVATLKQSKTDGYQPTVNDYVKFPGIESLLPPEAKGQNISSILEIQGCTGVEIHRASGLMAGFLFRGCHFCKMVDANNPSGGKDGIITFENLNGDWGKGNYVIGGRTCYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSAVLYPVWDGFDLGADTDMNPEDDRPGDFPISQYPVHMLPLNHLIDNLFVRGSLGVGFGMDGQGLYVSNITVEDCAGSGAYILAHETVFTNIAIIDTNTKDFPANQIYISGACRVNGLRLVGIRSTSGQGLTIDAPNSTVSGITGFVDPSRINVANLMEEGLGNSRINSFNNDSAALRLRIHKLSKTLDSASVYSHINGGPGSGSAWTEITAIAGSLPDAVSMKINRGDYRAVEIPVAVSVLPDAAVRDNGSISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:684 AA
molecular weight: 72707,53670 Da
isoelectric point:5,05716
aromaticity:0,08772
hydropathy:-0,14854

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–135
G3DSA:2.10.10.80 IPR011050
G3DSA:2.10.10.80
ATT
65–130
G3DSA:2.10.10.80 IPR015331
IPR040775
RBD
71–131
IPR040775 IPR012332
IPR015331
RBD
138–684
IPR015331
AYP69664.1
1 684
Architecture
ATT
STR
ATT 65-135 | STR 136-684
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYP69664.1
1 684
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9915
Central domain 156 598 444 0,9864
C-terminal 599 684 85 0,8443
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-598
C-terminal
599-684

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_phi135
[NCBI] 		2420239 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYP69664.1 [NCBI]
Genbank nucleotide accession
MH992509.1 [NCBI]
CDS location
range 17952 -> 20006
strand -
CDS
ATGTCCAGCGGTTGCAGTGATGTAATGTCACTTAATGATTTACAGATAGCCAAAAAACACCAGATTTTCGAAGCCGAGGTTATCACCGGTAAACAAGGCGGTGTAGCCGGCGGTGCAGATATCGACTACGCCACTAACCCGGTAACCGGGCAGACGCAGAAGACGCTTCCCGCAGTCTTACGTGGTGCTGGTTTCTCCCCGGCATCTTTTAATTTTACGACCGGGGGTACTCTCGGCGTAAACGACGCAGATAAAGCTGTTCTTTGGCCGAAAGAAGATGGTGGAGACGGTAACTACTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCTGCGGCGTCGACACCTCTTGCGACAGGCGGCATTTCGGATTCCGCTTGGGACGCGTTCGGAGATATTACCTTTCGCGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAACTGGCGGATGCCGCCGTTGATAGTGTTCTTATTGACCGCGATTACACTTTCAGCAATAACGAGACCGTTAACTTCGGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATTGGTGATGGAAACCTGGTGTTTACGCAATTAGGTAAAGGCTCCATCGTAGCGGCCCCCTTTATGGAGAGTGCTACAACGCCGTGGGTTATAAAACCCTGGACCGACAATAATGAGTGGATAACCGACCCCGCTGCGGTTGTAGCAACACTGAAACAGTCTAAAACAGATGGATACCAGCCGACAGTAAACGATTATGTCAAGTTCCCGGGAATAGAATCACTCCTCCCCCCGGAAGCTAAAGGCCAAAACATTTCGTCTATCCTTGAGATACAGGGGTGTACAGGCGTTGAGATTCATCGGGCTAGCGGTCTTATGGCGGGTTTTTTGTTTAGAGGGTGTCATTTCTGCAAGATGGTAGACGCCAATAATCCAAGCGGAGGTAAAGATGGCATTATAACCTTCGAAAACCTTAACGGCGATTGGGGTAAGGGTAACTATGTCATTGGTGGTCGAACCTGCTACGGGTCAGTAAGTAGCGCCCAGTTTTTACGTAATAACGGCGGCTTTGAACGCGACGGCGGGGTTATTGGGTTTACCTCATACCGTGCAGGGGAAAGCGGTGTTAAGACGTGGCAAGGCACGGTAGGTTCTACGACCTCTCGTAACTACAACCTGCAATTCCGGGATTCTGCGGTACTATACCCTGTATGGGACGGCTTCGATTTAGGCGCAGATACTGACATGAACCCAGAAGATGACCGCCCGGGGGATTTCCCCATTTCTCAGTACCCGGTACATATGCTCCCGTTAAACCATTTGATAGACAATCTATTTGTTAGAGGTTCGCTGGGGGTAGGTTTCGGTATGGACGGGCAAGGTCTGTATGTCTCTAACATAACCGTCGAGGATTGCGCCGGTTCTGGGGCTTATATTCTTGCCCACGAAACAGTATTCACTAATATCGCAATAATCGACACAAATACTAAAGATTTTCCAGCGAATCAGATATACATCTCCGGGGCCTGCCGTGTAAATGGCCTTCGTTTGGTAGGCATACGCTCTACTAGTGGGCAGGGGTTGACGATAGACGCTCCTAACTCCACTGTAAGCGGTATAACGGGCTTCGTGGACCCATCAAGGATTAACGTAGCCAATTTGATGGAGGAAGGTCTTGGTAACTCACGAATTAATAGTTTTAATAATGATTCTGCGGCACTACGGTTACGGATACATAAACTGTCAAAAACTTTAGATAGCGCTTCCGTGTATTCACACATAAACGGCGGCCCTGGTTCTGGTTCAGCATGGACCGAAATTACCGCTATTGCGGGGTCCTTGCCTGATGCCGTGTCGATGAAAATCAACAGGGGTGACTATCGTGCAGTTGAAATACCAGTAGCGGTGAGCGTCCTACCCGATGCTGCTGTTCGAGATAACGGGTCTATATCGCTGTATCTTGAGGGGGATAGCCTTAAGGCGTTAGTTAAGCGGGCAGATGGCAGCTATACGAGGTTAACTTTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
30366517f6e8780e0c73f72ea58ae7a36bae64cf4e16bd9f4733be731032a2ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6851
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage interactions in dual species E. coli and Salmonella Enteritidis biofilms Milho,C., Silva,D., Alves,D., Oliveira,H., Sousa,C. and Sillankorva,S. 2019-12-03 — GenBank