Protein

View in Explore
Genbank accession
YP_009833539.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTQTQYYTLLTEIGKAAIANATALGTRVDFAKIKVGDGGGSAYIPTENQTALKNVVWESTLEHVQTDEKNPNWVVIQKTITGDTGNFIIREVGVFDSKDQLLAVSSYPETYKPAPDSGTVKEILIKIILAVSNAASINLKIDPTVVLATLKDIQDLDNKIDTTKTELTNNLETAKTELNNKIGDTTKLETTDKTNIVNALNEVKTSVDSIETTAEKTSYNNATSNLTATNVQNAIDEVVAKIEKFNEVNISIQNDMLPI
Physico‐chemical
properties
protein length:259 AA
molecular weight: 28193,35920 Da
isoelectric point:4,67475
aromaticity:0,04633
hydropathy:-0,27452

Domains

Domains [InterPro]
DC_1371
STR
1–255
DC_1371
IPR051934
Unmapped
2–255
IPR051934
IPR022225
ATT
3–150
IPR022225 Coil
YP_009833539.1
1 259
Architecture
ATT
STR
ATT 1-150 | STR 151-255 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCDHM14
[NCBI] 		1522091 Uroviricota > Caudoviricetes > Sherbrookevirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009833539.1 [NCBI]
Genbank nucleotide accession
NC_048665.1 [NCBI]
CDS location
range 15073 -> 15852
strand +
CDS
TTGACACAAACACAATATTATACATTACTTACAGAAATAGGTAAGGCTGCTATAGCAAATGCTACAGCACTCGGGACTAGAGTTGATTTTGCAAAAATAAAGGTTGGGGATGGTGGTGGAAGTGCATATATTCCAACAGAAAATCAAACAGCACTTAAAAATGTGGTGTGGGAAAGCACATTAGAGCATGTTCAAACAGACGAAAAAAATCCTAATTGGGTAGTTATCCAAAAAACTATAACAGGAGATACTGGAAACTTTATAATCAGGGAGGTTGGAGTATTTGATTCTAAAGACCAACTTCTCGCAGTATCTAGCTATCCCGAAACTTATAAACCTGCTCCGGATTCGGGAACAGTAAAAGAAATATTAATTAAAATTATATTAGCTGTGTCTAATGCAGCAAGTATAAATTTAAAAATAGACCCAACAGTTGTATTAGCAACTTTAAAAGATATACAAGATTTAGACAATAAAATTGATACAACTAAAACAGAATTAACAAACAACTTAGAAACTGCTAAAACAGAGTTAAACAATAAAATAGGTGATACAACAAAACTTGAAACAACAGATAAAACAAATATAGTTAATGCATTAAATGAGGTCAAAACTAGTGTAGATAGTATAGAAACAACAGCAGAGAAAACAAGTTATAATAATGCAACAAGTAATCTTACTGCTACAAATGTTCAAAATGCGATTGATGAAGTTGTTGCAAAGATAGAAAAATTTAATGAGGTTAATATATCTATACAAAATGATATGTTACCTATATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0f3f354a930d271344f951e7a7698ae56f26f4328a01dc2091c5bff9fde2163c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8829
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Abundant and diverse CRISPR spacers in Clostridium difficile strains and prophages target multiple phage types within this pathogen Hargreaves,K.R., Flores,C., Lawley,T.D. and Clokie,M.R.J. 2014-10-31 — GenBank