Protein

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Genbank accession
YP_007007979.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MIENTLPRKLVLGTIAPGYTKLYIPHSSYEDEDVVGKAFWVDGTRFIDTNIDVLYTIVDNLKDNTEYKLIEGSYYDAMVDSELLDNKLGINMSEASSAKTLEYPSIHNVIVGAQEVDIGVGDPIITMDIQGDAQSIRIDKKLSSEDDTHWQPCYSGAPDAVSFTTGQGTYDFRVIGFIYMPDGVTTESSPYSTIKNVKVENMFRPPSAPENINFKVAKIMDGIERYDLQVSWDWDKGTGSSVREFVLYFVETSEYNKTQWRKASKINSGAAKASVITSFPFNKEYKFKVAAIAWGPADQALTDSNTAAFKITSSTPLDSSFANETGIEVTYDHIKAYRDLAGRKEQTFRLDAKTGSLAIGKLDDQGHAPISVDPLSGNVNVDGAVISKTMYSASFVLSNLSGKDNPSIRTASKTGYGQSAQGMWMGYTNNDQKFKFDLGDSTKFIRWDGEKLLISGKVQIGTPGGNVDIDKGIQGNFVANIYKEAATQPSAPLGNNYPPAGWSEAPITNATDLVWISTAVIDSKTNQVASGSAWSTPIQFTAKAGEDGVASVIIYKQSATQPATPTNKSIPPAGWALQAPARAVGQSIWVSSAVRTGNEPNITGNWSVPSKFSGDQGDQGIPGRNGRDGQTFYTWIKYADAASGAGMSNSPTGKKYIGIASNMTSSTESNNPTDYTWALMKGDQGIPGTNGKDGKTTYTWIKYADDSAGRGFSDDPTGKAYLGIATNKTVQQESSDWRDYRWSKIQGEKGDTGIPGRNGKDGRTTYTWVKYADNATGAGMSDNPAGKKYIGIAVNQLSPTESTNPSIYTWSKFEGDAGVPGRNGVDGKTYYTWIKYADNSSGGGISNSGIGKKYIGFAYNKPTPTESNNPRDYTWSLIQGPAGKDGRPGRDGANGTNGKDGSRGPGFYSQAINGFSGFNTSSAATFFRNTFGSGPVKYDILTQFNTSKPSIAEARQWNGSSWVSAALLVHGNMIVDGSITAKKLIATDAFLQQIGVNKIYDNAAAQTSNPEANYKMKIDLQKGSIHIR
Physico‐chemical
properties
protein length:1028 AA
molecular weight: 111011,78030 Da
isoelectric point:6,00751
aromaticity:0,10214
hydropathy:-0,50866

Domains

Domains [InterPro]
IPR057550
STR
10–94
IPR057550 IPR057551 DC_1191 DC_1191
IPR057551
STR
102–190
IPR057551 IPR057552 IPR057549 IPR057549
IPR036116
STR
228–292
IPR036116 PTHR24637
DC_0002
STR
523–683
DC_0002
YP_007007979.1
1 1028
Architecture
STR
STR
STR
STR 10-94 | STR 100-190 | STR 196-1028
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage pVp-1
[NCBI] 		1150989 Uroviricota > Caudoviricetes > Demerecviridae > Vipunavirus > Vipunavirus pVp1
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007007979.1 [NCBI]
Genbank nucleotide accession
NC_019529 [NCBI]
CDS location
range 103858 -> 106944
strand +
CDS
ATGATTGAGAATACATTACCAAGAAAACTAGTTCTAGGTACTATTGCTCCGGGATATACAAAACTGTATATCCCTCATTCTAGCTACGAGGACGAAGACGTAGTTGGTAAAGCATTTTGGGTAGATGGAACTAGATTTATAGACACAAATATAGATGTTTTATATACTATAGTCGATAATTTAAAAGACAACACAGAATATAAACTTATCGAAGGGTCTTACTATGATGCTATGGTAGACTCAGAGCTTCTGGACAATAAGCTAGGTATTAATATGTCAGAAGCATCTTCAGCAAAAACGTTGGAGTATCCTAGCATTCACAATGTTATAGTAGGTGCTCAAGAAGTAGATATTGGTGTTGGTGATCCTATTATAACTATGGATATACAAGGAGACGCTCAATCTATAAGAATAGATAAGAAGCTGTCTTCTGAGGACGATACTCACTGGCAACCTTGTTATAGTGGTGCTCCAGATGCGGTATCTTTTACTACAGGGCAAGGCACATATGACTTTAGGGTTATAGGTTTCATTTATATGCCTGATGGGGTTACTACAGAATCCTCACCTTATAGTACAATAAAAAATGTTAAAGTAGAGAACATGTTCCGCCCACCTAGTGCTCCGGAGAATATTAATTTTAAAGTAGCAAAAATAATGGATGGGATAGAGCGTTACGACCTACAAGTAAGTTGGGACTGGGATAAAGGTACTGGCAGTTCTGTCAGAGAATTTGTTCTTTACTTTGTAGAGACTAGCGAGTATAATAAAACTCAATGGAGAAAGGCAAGCAAAATTAACAGTGGTGCTGCTAAAGCATCAGTGATTACAAGTTTTCCTTTTAATAAAGAATACAAATTTAAGGTAGCCGCTATAGCATGGGGTCCTGCTGACCAAGCACTAACCGACTCTAATACCGCAGCCTTTAAAATTACAAGCTCAACCCCTCTAGACTCTTCTTTTGCCAATGAGACCGGCATAGAAGTTACTTATGACCATATCAAAGCATATAGAGACCTAGCAGGTAGAAAAGAGCAAACATTTAGACTAGATGCGAAAACTGGTTCATTAGCTATTGGTAAGCTAGATGACCAAGGTCATGCGCCTATTTCTGTTGACCCTTTAAGTGGTAATGTCAACGTAGATGGTGCGGTAATATCAAAGACAATGTACTCAGCTTCTTTTGTATTATCTAATTTATCTGGTAAAGATAATCCTAGTATAAGAACAGCATCTAAGACAGGGTATGGACAATCTGCACAAGGTATGTGGATGGGTTACACTAACAATGACCAGAAGTTTAAGTTTGACCTAGGAGATTCCACCAAGTTTATTAGATGGGACGGGGAGAAGCTCCTTATATCTGGTAAAGTACAAATTGGTACTCCAGGTGGTAATGTGGACATAGATAAAGGTATTCAAGGTAACTTTGTAGCCAATATCTATAAAGAAGCAGCTACACAACCAAGCGCCCCTTTAGGTAATAATTATCCACCAGCAGGTTGGAGCGAAGCCCCAATTACCAACGCTACAGACTTAGTATGGATTTCTACGGCTGTTATAGATTCTAAGACTAACCAAGTTGCTAGTGGTAGTGCATGGTCTACGCCAATCCAGTTCACAGCTAAAGCAGGGGAGGATGGTGTTGCATCTGTTATTATATATAAACAGTCAGCTACACAGCCAGCTACCCCAACAAATAAATCCATACCACCAGCAGGATGGGCATTACAAGCCCCAGCAAGGGCGGTAGGACAATCCATCTGGGTATCTAGTGCAGTACGTACCGGTAATGAGCCTAACATCACCGGTAACTGGTCTGTTCCTAGTAAGTTTAGTGGTGACCAGGGTGATCAAGGTATTCCGGGACGAAATGGTAGGGACGGCCAAACCTTTTACACTTGGATTAAATATGCTGATGCAGCCTCAGGCGCAGGCATGAGTAATTCACCGACTGGTAAAAAATATATTGGTATCGCTAGTAACATGACAAGCTCTACTGAAAGTAATAATCCTACTGATTATACTTGGGCTCTTATGAAGGGTGATCAAGGTATTCCAGGTACCAATGGTAAGGATGGCAAAACTACATATACTTGGATTAAGTATGCTGACGATAGCGCAGGGAGGGGCTTTTCAGACGATCCTACTGGTAAGGCTTACCTTGGTATAGCTACTAATAAGACTGTACAACAGGAAAGTAGTGATTGGCGAGACTATAGATGGAGTAAGATTCAAGGAGAAAAAGGAGACACCGGTATTCCTGGTCGTAACGGTAAAGATGGTAGAACTACATATACTTGGGTTAAGTATGCTGATAATGCTACAGGAGCTGGCATGTCAGATAATCCAGCTGGTAAGAAGTATATAGGTATTGCGGTTAACCAACTATCTCCAACCGAAAGTACTAACCCTAGTATTTATACTTGGAGTAAGTTTGAAGGTGACGCAGGTGTTCCTGGCCGTAATGGTGTAGATGGTAAGACTTACTATACTTGGATTAAATATGCGGATAACTCTAGTGGTGGCGGTATTTCTAATAGCGGTATTGGTAAGAAGTATATTGGTTTCGCATATAATAAACCCACACCTACTGAGAGTAATAATCCTAGAGATTATACTTGGAGTTTAATTCAGGGCCCGGCAGGTAAAGACGGGCGTCCTGGTAGAGACGGTGCTAATGGTACAAATGGTAAGGATGGTAGCAGAGGACCTGGCTTCTATTCTCAAGCTATAAATGGTTTCTCAGGATTCAATACTAGTTCGGCAGCCACATTCTTCCGTAATACTTTCGGGAGTGGGCCAGTTAAGTATGACATACTTACTCAGTTTAATACTAGCAAGCCCTCAATAGCAGAGGCTCGTCAATGGAATGGCTCTAGTTGGGTTAGTGCGGCGTTATTAGTGCACGGTAACATGATAGTGGATGGCTCTATAACTGCTAAAAAACTTATAGCTACCGATGCGTTCTTGCAACAAATAGGTGTTAATAAGATTTACGATAATGCAGCAGCGCAGACTAGTAACCCTGAGGCCAATTACAAAATGAAGATAGACCTTCAAAAAGGCTCTATACATATAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
42b8f69c7ef260a6fe6d2d643dba9f5d5382718172ff9c39622b598ca0cd7304
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2848
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50