Protein

View in Explore
Genbank accession
AAB41477.1 [GenBank]
Protein name
unknown protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MKANLALLNEDKEQVIVSKNLTFISDNSTVTDLAQEVNNKIDDFTKLLLENMPQVMRSELNDLHAQTESNKSNIELKANLADVTSLQHAMTLLQNEVEVFGITPENLVTIKSLLDAIASNASQSQVSELINSVSTLTSNISLMSNGDYSPKANQTDLESLQHTVNDHSATISTKANQTDLDNLQATVDKQGVAISTKAEQSELSITNKNVTTVQETAKQAESEAKNAMAKATEAQANSLPLNGNAVSASKLETARKLGVNLQSSAQQNFNGTTDVTNIGVSGVLPIANGGTATSDGVINTIAYANSADGTDGFTTVYPNLNLLLDFQNQVKSGAWYMPNIGWTDKMGTYLGSRIWPTTREWDNARYSYKDLLDRGVINTTDDFTYSIYFRVVGEDPAGMSYASIKFISEATTKNGSTPAQLTSLKEGQWTRIVVNFKFNGTKYEPDKPWGTALRVEVSASPKVKGAYYEFAAPKLELGSIATPCIQSASEVTAADYPKYVGFSNIIKPNKKSSDYKWLPMGLVSIDSATGSLKPAVIGIDCAQAHPVGSVVTNNSNLSSGYSTGKWENIGSAVIGSVTVYHWQRTA
Physico‐chemical
properties
protein length:586 AA
molecular weight: 63229,79100 Da
isoelectric point:5,10934
aromaticity:0,06826
hydropathy:-0,31980

Domains

Domains [InterPro]
DC_0775
STR
55–145
DC_0775 DC_0775
Coil
Unmapped
210–237
Coil
AAB41477.1
1 586
Architecture
STR
STR
STR 55-145 | STR 173-586
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage phi41
[NCBI] 		47298 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAB41477.1 [NCBI]
Genbank nucleotide accession
L35061 [NCBI]
CDS location
range 8326 -> 10086
strand +
CDS
TTGAAGGCGAACTTAGCACTTCTCAATGAAGATAAAGAACAAGTTATTGTCAGTAAGAATTTAACATTTATATCAGATAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGATTTTACAAAATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGATTTACATGCTCAAACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCAAATTTAGCTGATGTGACGAGCTTACAGCATGCAATGACACTCCTGCAAAATGAAGTAGAAGTGTTTGGTATTACTCCTGAAAATTTAGTGACTATAAAGTCGCTATTAGACGCAATTGCAAGTAACGCTAGTCAATCTCAAGTTTCTGAACTAATAAATTCAGTAAGTACTTTAACAAGCAATATTTCTCTGATGAGTAATGGAGATTATTCCCCTAAAGCTAATCAAACGGATTTAGAAAGTTTACAGCATACTGTTAACGACCATTCGGCAACCATTTCAACAAAAGCCAATCAAACGGATTTAGACAACTTACAAGCTACTGTTGATAAACAGGGTGTTGCAATTTCAACAAAAGCTGAACAATCAGAGTTATCAATCACAAATAAAAATGTAACAACTGTTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGCCAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTACCACTTAATGGCAATGCGGTCAGCGCAAGCAAACTGGAAACAGCTAGAAAACTTGGAGTAAATCTTCAATCTTCAGCACAGCAAAATTTTAATGGGACTACTGATGTAACTAATATTGGAGTTTCAGGGGTGCTACCTATTGCAAATGGAGGTACTGCAACAAGTGACGGAGTTATAAATACAATAGCATACGCTAACAGTGCAGACGGTACGGACGGTTTCACGACTGTTTATCCAAATTTGAATTTATTGCTTGATTTTCAGAACCAAGTCAAAAGCGGGGCGTGGTATATGCCAAACATCGGCTGGACGGATAAAATGGGGACTTATCTGGGGTCAAGAATATGGCCTACTACACGCGAATGGGATAATGCTCGATATAGCTATAAAGACCTATTAGACCGAGGTGTCATTAACACCACAGACGATTTTACCTATTCTATTTACTTTAGAGTAGTTGGAGAAGACCCCGCAGGTATGTCATATGCCTCTATCAAATTTATATCAGAAGCCACTACAAAAAACGGGAGTACACCTGCGCAACTAACCAGCTTAAAAGAGGGTCAGTGGACACGAATAGTAGTTAATTTTAAGTTTAATGGCACTAAATACGAACCAGATAAACCATGGGGTACCGCTCTACGTGTAGAAGTGTCAGCATCGCCAAAAGTAAAGGGTGCGTACTATGAGTTTGCAGCGCCCAAGCTTGAGCTAGGTAGTATTGCTACTCCTTGCATACAATCAGCTAGCGAAGTAACAGCTGCTGACTACCCAAAGTATGTAGGGTTTAGTAATATCATTAAACCTAATAAGAAGAGTTCTGATTACAAATGGCTACCAATGGGGTTGGTGTCAATTGACAGTGCTACCGGATCACTCAAGCCTGCGGTTATAGGTATAGATTGCGCTCAAGCTCACCCAGTTGGTTCAGTAGTCACAAATAACTCAAATTTATCATCAGGATATTCCACAGGAAAATGGGAAAATATTGGTTCAGCAGTAATCGGTTCAGTAACGGTATATCATTGGCAACGAACTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
052b3c716ce722914d88c571c67e6b93f42783d662e7c0f996ca2128f60c30a5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5885
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Gene organization and transcription of a late-expressed region of a Lactococcus lactis phage Parreira,R., Valyasevi,R., Lerayer,A.L., Ehrlich,S.D. and Chopin,M.C. 1996 8892814 GenBank