Protein

View in Explore
Genbank accession
QLF88559.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,80
Protein sequence
MTNARDKANIPSLNFSSTGIDDNATSTAITIDSSERVGIGTSSPSQLLHIENGDVLIKETGTSDPLINFATTSQTWTLRIDNSDSDKFQLRNATGGNTVFTADSSGNVGIGDTAPDGSLHITRSSSSLQFVLERTTSNTGKFGIGINNGLVFNDLVTSTERMRINSSGNVGIGTSSPSSLFHIESASSDPTLRITNKTVAAIDTGPDIEFWNNPFTGSTTNSYESGAIRVRKTSGSNNTHDHYMSFWTRQNSPEGINERMRIDSSGNVGIGTTSPDASTYFGGKILHIADSSNAGIMFNRTSSTAAKWSVGCNSGGNLDFVKENSVKMRIDSSGNVLIKKTTSGFNTAGFEVKSGDEPIYVTTENNYNLLVNRKSSDGDLIRFYRSTSQKGSITVSGETVSYNAFTGSHWSRFTDNSKPTILRGTVLETLDEMLDWYNLEYNITTTTKDEDGNDVTNTETFGVPHVLTDSQSVGDVITYNHEGTDYQATIVKEADVKHMMSKVSDTTDAKNVYGVFNCYDEEQSEEGYNDFLVASVGSFLVRIKANETIAKGDLLQSNGDGTAKVQSDDNVKSSSFAKVLSTTIIETYEDGSYLVPCSLMC
Physico‐chemical
properties
protein length:601 AA
molecular weight: 64879,21450 Da
isoelectric point:4,80081
aromaticity:0,07654
hydropathy:-0,45374

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLF88559.1
1 601
Domain Start End Length (AA) Confidence
N-terminal 1 444 444 0,0009
Central domain 445 590 147 0,1844
C-terminal 591 601 10 0,9906
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-444
Central
445-590
C-terminal
591-601

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage Ran EXVC014P
[NCBI] 		2736234 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp
[NCBI] 		2024849 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF88559.1 [NCBI]
Genbank nucleotide accession
MT375530.1 [NCBI]
CDS location
range 1 -> 41529
strand -
CDS
ATGACTAACGCAAGAGATAAAGCTAACATACCTTCGCTAAACTTTTCATCTACAGGTATAGATGACAATGCTACAAGTACAGCTATTACTATTGATAGTTCAGAAAGAGTTGGGATTGGTACAAGTAGTCCAAGCCAATTACTTCATATTGAAAATGGAGATGTATTGATAAAAGAAACAGGTACATCTGACCCACTTATAAATTTTGCTACGACTTCTCAAACATGGACTTTAAGAATAGATAATTCTGATAGCGATAAATTTCAATTAAGAAATGCTACTGGTGGTAATACTGTTTTCACTGCCGACAGTTCTGGTAACGTAGGTATTGGTGATACTGCTCCTGATGGCTCTTTACACATAACAAGAAGTAGTAGTTCATTACAATTTGTTTTAGAAAGAACAACATCTAATACTGGAAAATTTGGTATTGGTATTAACAATGGATTAGTTTTTAATGATTTAGTCACAAGCACAGAACGTATGCGTATCAACAGTTCTGGTAACGTAGGTATTGGTACAAGTAGTCCATCAAGTTTATTTCATATAGAAAGTGCTTCCTCTGACCCTACGTTAAGAATTACAAACAAAACAGTGGCTGCAATTGATACTGGTCCAGATATAGAATTTTGGAATAATCCTTTTACTGGTAGTACAACCAATTCTTATGAGTCTGGTGCAATAAGAGTTCGTAAAACTAGTGGTTCTAATAACACCCATGACCACTACATGTCTTTCTGGACAAGGCAAAATAGTCCAGAGGGAATAAATGAACGTATGCGTATAGATAGTTCTGGTAATGTAGGTATTGGTACAACTTCTCCAGATGCATCAACTTATTTTGGTGGTAAAATTCTTCATATAGCAGATTCATCTAATGCAGGAATTATGTTTAACAGAACTAGCTCAACAGCTGCAAAATGGTCAGTAGGTTGTAATAGTGGTGGTAATTTAGATTTTGTTAAAGAAAATTCTGTAAAAATGCGTATCGACAGTTCTGGTAACGTATTAATTAAAAAGACTACATCTGGTTTTAATACAGCAGGATTTGAAGTAAAATCTGGAGATGAGCCAATATATGTAACAACAGAAAATAATTATAATTTATTAGTTAATCGAAAGTCAAGTGATGGAGATTTAATTAGATTTTACAGAAGTACAAGTCAAAAAGGAAGTATAACTGTATCAGGAGAAACAGTTTCTTATAACGCATTTACTGGTTCTCACTGGTCAAGATTTACAGATAATTCTAAACCTACAATTTTAAGAGGTACAGTTTTAGAAACTTTAGATGAGATGTTAGATTGGTACAATTTAGAATACAATATAACAACTACAACAAAAGATGAAGATGGTAATGATGTAACTAATACTGAAACATTTGGAGTACCTCATGTTTTAACAGATAGTCAATCAGTTGGAGATGTAATTACCTACAACCATGAAGGAACAGATTATCAAGCAACAATAGTTAAAGAAGCTGATGTTAAACACATGATGTCAAAAGTATCTGACACAACAGATGCTAAAAATGTTTATGGTGTATTTAATTGTTATGACGAAGAACAAAGCGAAGAAGGTTATAATGATTTTCTTGTTGCATCAGTTGGTTCATTTTTAGTTAGAATAAAAGCTAATGAAACTATTGCTAAAGGAGATTTACTTCAATCAAATGGAGATGGAACTGCAAAAGTACAATCAGATGACAATGTTAAATCTAGCAGTTTTGCAAAAGTATTATCGACAACGATAATAGAAACGTATGAAGATGGTTCTTATTTAGTTCCATGTTCATTAATGTGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a4f45ee4cace1058d890db72202246107dbb9781589f11930d02d07b2b4da5bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7599
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50