Protein

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Genbank accession
AEH21846.1 [GenBank]
Protein name
VHS1033 protein
RBP type
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MSSDVIPTDQTELQKQIDEMLTVTPPTSERGRLFHLLNQAVKNAASSGGDSGGGSNAVTNAIQLGTFTISPDGDNVPAQQCFLNRNQLIFSNQVGESPGDRLPFSYTGLVRSKDFDYILTGQFGGGAFNMYIDSFTTHNGSTDNDRTFVGHNTMIPPLPPGTSVTIHAVPKTKGSNNPYGTSAGLLFDLRLVDVSTTDAATFNSENISAIPFDAGFNQPDLSTNNQMFLKVPQETWDLINTQFQGNILSAGTATATIVVYDRGVFQGAIFGFFDSTRSYDADTDIMTLTFENNAVLSPRTLTMSNDSAFNVRVFVDYGA
Physico‐chemical
properties
protein length:319 AA
molecular weight: 34397,61560 Da
isoelectric point:4,42636
aromaticity:0,09718
hydropathy:-0,23072

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1
[NCBI] 		187944 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEH21846.1 [NCBI]
Genbank nucleotide accession
JF713456 [NCBI]
CDS location
range 16202 -> 17161
strand +
CDS
ATGTCTTCAGACGTTATACCAACAGATCAAACAGAACTGCAAAAGCAGATCGACGAAATGCTAACAGTCACCCCGCCTACTTCAGAGCGTGGGCGTTTATTTCACTTACTCAATCAAGCCGTTAAGAATGCCGCTTCTAGTGGTGGCGACAGTGGCGGCGGCAGTAATGCCGTTACTAACGCGATCCAGTTAGGCACATTCACTATAAGCCCTGACGGTGATAACGTACCCGCACAACAATGTTTCTTAAACCGTAATCAATTGATTTTTTCGAATCAAGTAGGCGAATCACCGGGAGATCGATTACCATTTAGTTACACGGGCTTAGTTCGATCTAAAGACTTTGACTATATCCTGACGGGTCAGTTTGGCGGTGGTGCGTTCAATATGTATATTGATTCGTTCACGACACACAACGGATCTACCGATAACGATAGAACCTTCGTAGGACACAACACCATGATCCCGCCGTTGCCGCCGGGAACTTCGGTAACAATTCACGCAGTACCTAAGACGAAGGGAAGCAATAACCCATACGGCACAAGCGCGGGTCTTCTCTTTGATTTGCGCCTTGTTGACGTTAGCACTACCGACGCCGCGACGTTCAATTCAGAGAACATTTCGGCTATCCCGTTCGACGCCGGATTTAATCAGCCTGATCTATCAACAAACAATCAGATGTTTTTAAAAGTACCGCAGGAAACGTGGGATCTTATTAACACGCAATTTCAAGGTAATATCTTGAGTGCGGGGACGGCTACCGCTACGATCGTAGTTTATGATCGCGGTGTATTCCAAGGCGCGATCTTCGGCTTCTTCGATTCGACCCGGTCTTATGACGCTGACACGGATATTATGACGCTCACGTTTGAAAATAACGCGGTACTATCCCCTAGAACGTTAACGATGTCGAACGACTCAGCGTTTAATGTTCGTGTATTTGTGGACTACGGCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7c7983a22fd031dac2f1ff2030c647d6d993fc31f10704b1717e44de25b0709a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3561
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Virulence-Enhancing Siphophage VHS1 from Vibrio harveyi Khemayan,K., Prachumwat,A., Sonthayanon,B., Intaraprasong,A., Sriurairatana,S. and Flegel,T.W. 2012 22307287 GenBank