Protein

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Genbank accession
WQY91225.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MALIIHYTRNDNGSFDTKRYYDNPMEFVTKTIPDGVPFEIYHNVIGEDSRVTEDFEALKQSGTFHIIESAGGGAISGALGFISKILNPILKLLMPSQKVSSPDLANQQAESPNNSLTNRNNKPRPYERSYDICGTVQSIPCDLMTVYRLYNSAGKVIEYGYYDVGRDYLDTPASGITDGDTLLSSITGSSAAVYAPFTSPNSGHAPQTLVGDPITQNLYITASVNEIDGQTLKAPNDLQIDVSGFNVVYVGGGVGRLTSATGDAAFDDVFKINDIAFFDEVRAQRSGSDLDLTGNYPVLFVNATELQVDVSSNVGQWSQVPATDGVIGTEGRHQVGPDDTYEASFTDWVTVDRIDSERIVANISADNGMYKENNDGKQRASVTAEIQYQAVAGGVPYGPLYMAQGSVSGRSSEATGFTIIGALPTPSGFRVRARRVTNLDRGFEGQVVDEIKYSNLYGQTRDTTSEYGNRTTVHTARRQTPRATAVKQPQLKMIVTEMVFKYLGGGVFDTVRTKNTQAVQSLIRLMRDPVVGNTQLSNDNMDKLIATQAEVEGYFRSTAAGQFCYTFDNYATTAQEIITTIAEAIFCSATRRGHSILLNLERPRLGPEMVFTHRSKAPSGEKWTRQFNNRSAYDSLKFSWINPDTNIKETIQIPEGGGVKTDTFDSKGIRNYQQAYWHAWRRYQRNKLNRVAVEFTALEEGALAVPARPISVVKGSRVSPYDGYVVAVDGLTLTLSQNVVFEEGEDHSVILKRRDGTVQSVQVAPGGNDRTVIMLSAPQEAIYTGNSALKTEFSFGSDSRHAAQMMMVSTVEPSDDRTVKITGFNYDAGYYDKDGVPPFGRAFSVGFDNGFS
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93389,86840 Da
isoelectric point:5,25871
aromaticity:0,09390
hydropathy:-0,37406

Domains

Domains [InterPro]
DC_0118
STR
1–684
DC_0118 DC_0808
NF040662
Unmapped
356–832
NF040662
WQY91225.1
1 852
Architecture
STR
RBD
STR 1-684 | RBD 698-846 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WQY91225.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 235 235 0,9561
Central domain 236 434 200 0,2380
C-terminal 435 852 417 0,0958
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-235
Central
236-434
C-terminal
435-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Hafnia phage TS33
[NCBI] 		3110108 No lineage information
Host Hafnia sp. JB232
[NCBI] 		1434830 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Hafniaceae > Hafnia >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WQY91225.1 [NCBI]
Genbank nucleotide accession
OR844384 [NCBI]
CDS location
range 34101 -> 36659
strand +
CDS
TTGGCGCTAATAATCCACTACACCCGCAATGATAACGGCAGCTTTGATACCAAGCGCTATTACGATAACCCTATGGAATTCGTCACTAAGACAATTCCTGATGGAGTGCCATTTGAGATTTATCACAACGTAATAGGTGAAGATTCCCGCGTTACAGAAGATTTTGAAGCGCTGAAACAATCAGGCACGTTCCACATTATCGAAAGCGCCGGCGGCGGGGCTATCAGTGGTGCACTGGGCTTTATCAGTAAGATTCTTAACCCAATCTTAAAATTGCTTATGCCTTCGCAAAAGGTATCGTCACCAGACCTAGCCAACCAGCAAGCGGAAAGTCCGAACAACAGCCTGACGAACCGCAACAACAAGCCGCGCCCTTACGAACGTTCATATGATATTTGCGGCACCGTGCAAAGCATTCCGTGCGACTTAATGACAGTGTACCGCTTATACAATAGTGCTGGTAAAGTAATCGAATACGGCTATTACGATGTAGGGAGAGATTACTTAGATACGCCCGCATCCGGTATTACCGACGGTGATACATTGTTATCTTCAATTACGGGTTCCTCGGCTGCCGTGTACGCACCATTTACTAGCCCTAACAGTGGTCACGCGCCACAGACGTTAGTTGGCGACCCAATCACGCAGAATTTATATATAACCGCGTCAGTTAATGAAATTGACGGCCAGACACTGAAAGCACCTAACGACCTACAAATCGACGTAAGCGGCTTTAATGTGGTTTATGTTGGCGGTGGCGTAGGCCGATTAACCTCGGCAACGGGTGACGCCGCATTTGATGATGTTTTTAAAATAAACGATATAGCATTCTTTGACGAGGTACGGGCGCAACGCTCCGGTTCGGATTTGGATTTAACAGGTAACTACCCCGTACTATTTGTTAATGCTACTGAATTACAAGTAGATGTATCTAGCAACGTAGGTCAATGGTCGCAAGTACCCGCTACCGACGGCGTAATAGGTACGGAAGGGCGTCACCAAGTCGGGCCAGACGATACATACGAGGCTAGTTTTACAGACTGGGTTACGGTAGACCGTATCGATTCAGAGCGTATTGTCGCTAACATTAGCGCCGATAACGGGATGTACAAAGAGAACAACGACGGTAAACAGCGCGCATCAGTTACGGCTGAAATTCAGTACCAAGCCGTTGCCGGGGGTGTTCCATACGGTCCGCTTTACATGGCGCAAGGTTCGGTTAGCGGACGTTCCTCCGAGGCTACGGGTTTCACTATTATCGGCGCTCTACCCACTCCGTCGGGTTTCCGTGTTCGCGCGCGTCGCGTGACTAATCTTGACCGAGGTTTTGAAGGACAGGTAGTAGATGAAATTAAATATTCTAACCTTTATGGGCAGACCCGCGATACAACCTCAGAATACGGCAACAGAACTACGGTACACACTGCGCGCCGACAGACGCCAAGAGCTACGGCGGTTAAACAACCACAGCTTAAAATGATTGTCACTGAAATGGTGTTTAAATACCTTGGCGGTGGGGTGTTTGACACGGTGCGTACTAAGAACACGCAAGCGGTGCAATCACTAATCCGCCTAATGCGAGACCCTGTTGTAGGTAACACCCAGCTAAGTAACGATAACATGGATAAGTTAATCGCAACCCAAGCAGAGGTAGAAGGCTATTTTCGCAGCACGGCCGCAGGGCAGTTCTGCTATACATTCGATAATTACGCCACCACGGCACAGGAGATTATAACAACTATTGCAGAGGCCATTTTCTGTTCGGCAACGCGTCGCGGTCATAGTATTCTGCTCAATCTTGAGCGCCCACGTTTGGGGCCAGAAATGGTATTCACGCACCGAAGCAAAGCGCCTTCCGGTGAAAAGTGGACGCGACAGTTCAACAACCGCAGTGCTTATGATTCATTAAAATTTAGCTGGATTAACCCAGATACAAACATTAAGGAAACTATCCAGATACCGGAAGGGGGCGGGGTAAAAACCGATACGTTCGACTCCAAAGGTATCCGAAACTACCAACAAGCATATTGGCACGCATGGCGTCGTTACCAGCGCAACAAATTAAACCGTGTTGCCGTGGAGTTTACCGCGCTGGAGGAAGGTGCCTTAGCGGTACCGGCTCGCCCTATTAGCGTTGTGAAAGGTTCGCGCGTGTCGCCTTACGACGGTTACGTCGTTGCCGTGGATGGGTTGACGCTAACCCTGTCCCAGAACGTTGTTTTCGAAGAAGGCGAGGACCACTCTGTTATTCTGAAACGTCGCGACGGCACGGTTCAAAGTGTGCAGGTTGCGCCCGGCGGTAATGATAGAACAGTGATAATGCTTTCAGCGCCACAGGAAGCCATTTATACTGGTAATAGCGCGCTTAAAACTGAATTCTCATTCGGCAGCGACAGTCGCCATGCAGCACAAATGATGATGGTAAGTACAGTAGAGCCAAGTGATGATAGAACAGTTAAAATCACAGGTTTTAATTACGACGCAGGATACTACGATAAAGACGGAGTACCACCATTCGGTCGCGCGTTCAGCGTAGGCTTTGATAACGGTTTTTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e17965ccd17d11c76249d66f05b4660f6e24e4587ae1e3fe36f89d3143099a0b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
O-antigen biosynthesis mediates evolutionary trade-offs within a simple community Spencer-Drakes,T.C.J., Heussler,G.E., Villareal,S. and Dutton,R.J. 2023 — GenBank