Protein

View in Explore
Genbank accession
YP_007676875.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAVTSNSYTGNGSTTNYSITFPYIATTDIKAQIDGIATTAFSLANATTVQFNSAPANGTDIVIFRETDDTTIPATFYAGSSIRSQDLNNNFTQTLYIGQETAARALTTLGGTMIGDLEMAKGSKVVFEGSTDDAHETTLTVTNPTADRTLTLPNVSGNVITSGDTGTVTKTLLAADSVDSSKIENATIVNADISGSAAIAGSKITAATTSAAGTLSAADKTKLDGIETGATGDQTNAEIRTAVEAANDSNVFTDSDHTKLNGIETAATADQTVSEIKTLIAGSPLDQNHLASNSVSNAAIADAELSTLAGMQSGTASILAGGTALTSTLTELNQLDGKTLGETTLTTNSDTAIPTSKAVNDQILAVTNALGGFVAIADELNFPNANPDPSDGAGTVVSISDAGGVVVNGSGVASIANGTVGNSTVTINGFPSTLYSKTLAAGVGLQVQTTTTLNTYTYHKLLAKEADVEQLSGDINDFNERYRIANSAPGSNNDEGDLWYDTANDKMKVYDGSAWGDVASTGSFFINTLSSYSGTGGNSASFNGSAYRFVLSNPPNAAEQLVVSINGVIQKPNSGTGQPSEGFSINGTSILFSAAPATGSDWFIITIGSSVTVGTPSANTVSTSILQNGSVTNDKVNAGAAIDVSKLSGVMPLAGGTITGDVVFDNATNAGNDLTWDMSDNALEFDDNVKATFGDGGDLQIYHDGSHSYIQDAGTGELRLRADAGIIRITKDDTETLAAFNVDGASELWYDNVKEFETKSGGVKLLGHSECAVNALGNVNSNPTFDFTVANYITLTLTGNVTVQNPTTESVGQSGSIIITQDGTGSRTCAWSNQFKWTGGAAPTLSTAANAVDRIDYLVVAADQIHCVASLDVK
Physico‐chemical
properties
protein length:874 AA
molecular weight: 89717,99620 Da
isoelectric point:4,20270
aromaticity:0,05950
hydropathy:-0,10046

Domains

Domains [InterPro]
DC_1390
STR
4–592
DC_1390
IPR005604
ATT
6–112
IPR005604 Coil DC_0955
YP_007676875.1
1 874
Architecture
ATT
STR
ATT 4-112 | STR 113-870 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage SS120-1
[NCBI] 		616674 Uroviricota > Caudoviricetes > Autographivirales > Banchanvirus SS1201 >
Host Prochlorococcus marinus subsp. marinus str. CCMP1375
[NCBI] 		167539 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007676875.1 [NCBI]
Genbank nucleotide accession
NC_020872 [NCBI]
CDS location
range 18878 -> 21502
strand -
CDS
ATGGCTGTTACATCAAACTCATACACAGGGAATGGTTCGACAACGAACTATTCAATTACATTTCCATATATAGCTACCACTGACATAAAAGCTCAGATCGATGGTATAGCAACAACAGCATTTTCATTAGCCAACGCAACTACTGTTCAGTTCAACTCAGCCCCTGCAAATGGGACTGACATAGTTATCTTTAGGGAAACAGATGATACGACTATCCCAGCTACTTTCTATGCTGGGTCTTCTATTCGTTCTCAAGACTTAAATAATAACTTCACACAGACTTTATATATAGGTCAAGAAACAGCAGCTAGAGCCTTAACAACTCTTGGGGGAACCATGATTGGTGACCTTGAGATGGCCAAAGGTTCTAAAGTTGTCTTTGAAGGATCTACTGACGATGCGCACGAAACAACTCTAACTGTAACCAATCCAACCGCAGATCGTACCCTAACTCTACCTAACGTCTCAGGTAATGTTATTACTTCAGGTGATACAGGCACAGTTACAAAAACATTGCTGGCAGCTGATTCAGTTGACAGTTCAAAGATTGAAAATGCAACGATTGTTAATGCTGATATCTCAGGCTCTGCAGCTATTGCAGGCTCAAAGATTACAGCAGCTACAACTTCTGCAGCTGGTACCTTATCTGCAGCTGATAAAACTAAATTAGATGGCATTGAAACCGGAGCTACCGGAGACCAGACTAATGCCGAGATAAGAACAGCTGTTGAAGCTGCTAATGACTCGAATGTTTTTACAGACTCAGATCATACAAAACTCAATGGTATTGAAACAGCTGCTACAGCAGATCAAACAGTCTCTGAAATTAAGACTCTCATAGCAGGTTCACCATTAGATCAAAATCATCTTGCATCCAATTCAGTTTCCAATGCAGCTATAGCAGATGCTGAACTCTCAACGCTTGCTGGTATGCAGTCAGGTACTGCATCTATATTGGCAGGCGGTACTGCTCTCACATCTACTCTTACTGAACTTAATCAGTTGGATGGTAAGACGCTCGGTGAAACTACCCTCACAACTAATAGCGATACAGCTATTCCGACTTCAAAAGCCGTTAATGATCAAATTCTAGCTGTAACGAATGCCCTAGGAGGCTTTGTTGCAATTGCGGATGAACTAAATTTCCCTAATGCTAACCCAGACCCCAGCGATGGAGCAGGTACAGTTGTATCTATTTCAGATGCAGGTGGAGTAGTTGTTAATGGAAGTGGAGTTGCAAGTATTGCTAATGGTACTGTAGGAAACTCTACGGTTACTATTAATGGTTTCCCATCAACTCTATATAGTAAGACTTTAGCAGCGGGTGTTGGTCTACAGGTACAGACAACAACTACACTAAATACATATACATATCATAAGCTATTAGCAAAAGAAGCTGATGTAGAGCAATTAAGTGGAGATATAAACGACTTTAATGAGAGATATCGGATAGCTAATAGTGCTCCAGGGTCAAATAATGATGAAGGTGACCTTTGGTATGACACAGCTAACGACAAAATGAAGGTCTATGATGGATCTGCATGGGGAGACGTAGCTAGCACTGGAAGTTTCTTTATTAATACGCTTTCTAGTTATTCAGGTACAGGTGGAAATAGTGCATCATTTAATGGATCAGCTTATAGGTTCGTACTCAGTAACCCTCCAAACGCTGCAGAACAGCTCGTTGTTTCTATCAATGGAGTCATTCAGAAGCCTAATAGTGGAACCGGGCAACCTTCAGAAGGATTTTCTATTAACGGTACTTCTATTTTATTCAGTGCCGCTCCTGCTACTGGTAGCGATTGGTTTATCATCACCATCGGATCCTCAGTAACTGTAGGTACTCCAAGTGCTAATACTGTATCGACTTCAATTCTTCAGAATGGATCGGTTACTAATGACAAGGTAAATGCAGGCGCAGCTATAGACGTTAGTAAACTCTCAGGAGTTATGCCTCTAGCAGGTGGAACCATAACTGGTGATGTTGTCTTTGATAACGCTACTAATGCTGGTAATGATTTGACATGGGATATGTCAGATAATGCATTGGAGTTTGATGATAACGTTAAGGCTACATTTGGTGATGGTGGTGATTTACAGATTTATCATGATGGAAGTCATTCTTATATTCAAGATGCTGGTACTGGAGAACTCAGATTAAGAGCAGATGCTGGTATAATTAGAATAACCAAAGATGATACAGAAACTCTAGCTGCTTTTAATGTAGATGGGGCATCAGAATTGTGGTATGATAATGTAAAAGAGTTTGAAACCAAATCAGGTGGTGTAAAACTACTTGGACACTCTGAATGTGCTGTTAATGCTTTAGGTAATGTCAACAGTAACCCTACGTTTGACTTTACTGTTGCTAACTATATAACTCTTACACTTACTGGTAACGTTACGGTTCAGAACCCTACAACAGAATCCGTTGGACAATCGGGGTCCATAATAATTACGCAAGATGGTACTGGTTCGAGAACTTGTGCATGGTCAAATCAGTTCAAATGGACTGGAGGTGCTGCACCGACTTTGAGTACAGCAGCAAATGCAGTTGACCGTATTGACTACCTTGTAGTAGCTGCAGACCAGATACATTGTGTAGCTAGCTTAGACGTTAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
72cbd13507ef84f8a722a5320799af8701a4b5c4282576abb67db8945cf11d9e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6635
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-SSP9 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank