Protein

View in Explore
Genbank accession
AEX26890.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAFSWIQPSFAGGEIGPSLYGRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYPDRKCRLIPFQFSTVQTYALEFGHNYMRVIKDGAYVLTTSDVIYELAMPYADTDLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQIVDVTTKNGPFEDINVDETVKVYASASTGTITLTASSAIFGAEQVGKLFYLEQPAVDSVPVWETSKTTAINDVRRADSNYYRANTAGKTGTLRPSHTEGMSWDGWGGTGSDDTGIQWEYLHSGFGIAKITAVAGDGLTATADVVSFIPSQVVGSANASYKWAKYAWNSVNGYPSTVVYYQQRLYFAASSAYPQTIWASRTGDYTDFGKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGNLVALTSGGEYTISGDQNKVLTPSAFSFSSQGNNGSSNVPPIAVANIALFIQEKGSVVRDLAYSFDVDGYQGTDLTILANHLFQKHSIVDWSFCIVPYSSAFCIRDDGKLLVLTYLRDQQVFAWAPQSSTGKYESTCSISEGSEDAVYFVVNRTINGQTKRYIERLSSRLFTNDEDAFFVDCGLSYDGRNTSSRTMTISGGTGDWNYQVDYPVTVSGGAYFVNTDVGAQIQFPYTGTDPDTNEPVAKELRGDIISVTSNTAVIVRFNRNVPPVLRNVATTNWQMARQTFGGLSHLEGQTVNILSDASVEPQKVVTGGSVTLESPGAVVHIGLPITAEFETLDININGQETLLDKKQVILTVTMVVNASRGIWATTPGGTWYEYPQREFEFYDDPVDEATGKVEVKLDSNWDKNGRVKVRQLDPLPLSVLAVLPRLTVGGF
Physico‐chemical
properties
protein length:825 AA
molecular weight: 90944,51350 Da
isoelectric point:5,11673
aromaticity:0,11394
hydropathy:-0,23891

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AEX26890.1
1 825
Domain Start End Length (AA) Confidence
N-terminal 1 160 160 0,9871
Central domain 161 367 208 0,2530
C-terminal 368 825 457 0,1040
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-160
Central
161-367
C-terminal
368-825

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPN1S
[NCBI] 		1125653 Uroviricota > Caudoviricetes > Uetakevirus >
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host bacterium
[NCBI] 		1869227 cellular organisms > Bacteria > unclassified Bacteria >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEX26890.1 [NCBI]
Genbank nucleotide accession
JN391180 [NCBI]
CDS location
range 8916 -> 11393
strand +
CDS
ATGGCTTTTAGCTGGATTCAACCGAGCTTTGCCGGTGGTGAAATTGGTCCGTCACTGTATGGCCGCATTGATATGTCAAAGTATCAGGTGGCACTGCGCAAGTGCGATAACTTCATTGTTCGCCAATATGGTGGTGTAGAGAACAGACCAGGTACGCGCTTTGTTGGTCCTGCTAAATACCCTGATCGCAAGTGCCGGTTAATCCCGTTCCAGTTCTCGACCGTACAGACCTATGCTCTGGAGTTCGGGCACAACTATATGCGAGTTATCAAAGACGGCGCTTATGTTCTGACGACCAGCGATGTGATTTATGAGCTGGCGATGCCGTATGCTGACACTGACCTTTTCCGCATTAAATTCACGCAGAGCGCCGATGTTCTGACGCTGGTGCATCCCGCATACCCGCCGAAAGAACTGCGCCGCTATGCGCACGACAACTGGCAGATCGTCGATGTCACCACCAAAAACGGGCCGTTCGAAGATATCAACGTTGACGAGACTGTGAAGGTATACGCCAGCGCCAGCACCGGCACCATCACGTTGACGGCAAGTTCTGCCATCTTTGGTGCTGAGCAGGTTGGAAAACTGTTTTATCTCGAGCAGCCTGCGGTTGATTCCGTTCCTGTCTGGGAGACCAGCAAGACCACAGCAATCAACGACGTTCGCCGTGCAGACAGCAACTACTACCGCGCCAATACTGCTGGTAAGACCGGGACCCTTCGCCCGTCTCACACTGAAGGTATGTCTTGGGATGGATGGGGCGGTACCGGATCAGATGATACCGGGATCCAGTGGGAGTACCTGCACAGCGGTTTCGGCATTGCAAAAATAACAGCAGTGGCTGGCGATGGCCTCACAGCAACTGCCGATGTGGTTTCGTTCATTCCATCTCAGGTTGTTGGCTCCGCTAACGCCAGCTATAAGTGGGCAAAATACGCGTGGAACAGCGTTAACGGCTACCCGAGCACCGTTGTTTACTACCAGCAGCGACTGTACTTTGCCGCGTCTTCTGCGTATCCGCAAACCATCTGGGCAAGCCGAACAGGAGATTATACGGACTTCGGCAAGAACAACCCGATTCAGGATGACGATCGCATCATCTACACCTACGCCGGACGTCAGGTGAATGAGATCCGTCACCTTATTGATGTTGGTAACCTGGTCGCTCTGACATCTGGCGGGGAATATACGATATCCGGGGACCAGAATAAGGTCCTCACGCCATCGGCTTTCTCGTTCAGCTCTCAGGGGAATAACGGATCAAGTAACGTGCCACCTATCGCTGTGGCTAACATCGCATTGTTCATCCAGGAGAAAGGCAGTGTTGTGCGTGATCTGGCCTACTCTTTCGATGTCGACGGGTATCAGGGAACCGACCTGACCATACTGGCCAACCACCTTTTCCAGAAGCATAGCATTGTCGACTGGTCATTCTGCATTGTGCCGTACAGCAGCGCTTTCTGCATTCGTGATGACGGCAAGTTGCTGGTGCTCACCTATCTGCGCGATCAGCAGGTTTTCGCCTGGGCACCGCAGTCCAGTACTGGTAAATACGAAAGCACCTGCTCAATCAGTGAAGGCAGCGAGGATGCTGTTTACTTCGTGGTTAACCGTACTATTAACGGACAGACAAAACGTTACATAGAACGCCTGTCCAGTCGTCTTTTCACCAACGATGAAGATGCGTTCTTTGTAGACTGCGGACTGAGCTACGACGGGCGCAATACATCATCACGCACAATGACCATCAGCGGTGGCACCGGTGACTGGAACTATCAGGTTGATTACCCGGTTACAGTAAGCGGTGGTGCGTATTTCGTTAATACTGATGTAGGCGCTCAGATTCAGTTCCCATATACCGGAACAGATCCAGACACCAACGAACCGGTGGCTAAAGAGCTGCGAGGCGATATCATTTCCGTGACCAGCAACACAGCCGTGATAGTTCGCTTCAACCGTAACGTTCCTCCGGTGCTTCGCAATGTGGCCACAACTAACTGGCAGATGGCGCGCCAGACGTTCGGTGGCTTGTCGCACCTCGAAGGTCAGACAGTAAACATCCTGTCAGATGCCAGCGTTGAGCCTCAGAAGGTTGTCACTGGTGGTTCAGTCACGCTGGAGTCACCAGGTGCAGTTGTGCATATCGGACTTCCTATCACTGCTGAATTCGAAACTCTTGACATCAATATCAACGGGCAGGAAACGCTGCTGGATAAAAAGCAGGTCATTCTTACTGTCACGATGGTGGTCAACGCAAGCCGTGGAATCTGGGCAACAACGCCTGGCGGAACATGGTATGAGTATCCGCAGCGTGAATTTGAGTTCTACGACGATCCTGTTGATGAAGCTACCGGCAAGGTTGAAGTGAAACTTGACAGCAACTGGGATAAAAACGGACGCGTTAAGGTTCGCCAGCTTGACCCACTTCCGCTTTCTGTTCTTGCTGTATTGCCTCGCCTTACCGTCGGAGGATTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c6c3aad6dedca2afa082beaf76159bda4c0eeb402da7b46a88f67f3c3462a8d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9160
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella enterica serovar typhimurium bacteriophage SPN1S Shin,H., Lee,J.H., Lim,J.A., Kim,H. and Ryu,S. 2012 22205721 GenBank