Protein

View in Explore
Genbank accession
QBX25855.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,60
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MKRNVRIAIRDTTDTHVVGFFDNKSGIKYNAANLTQFLKGSCSVLVLTYHSKKMVAQSGQKLAFRFKDKDFWLNINSVKKTGYNIELTAYSLSLEANKEKRGPHKPASAMTIKQYIEYYDPENSFVIGINEVADKSLKLEWSGTDTILARLYSVANGFGAELEFVTELNNDYSLKRHIINIYREGNLGKDKTGLPVRVGEKLKVINYSDNMDDFYTGIRRTGKDGLTIAGLNKKIYDDKGNLLFYSSGDTLYAPQARDKYPSIARKTNDGYIVNEDSGTEYANKEALFGYMLSELKKHCELKVDYEVEGAVDGNIGDKKTLIDAQHFDPPLYVQARISEQTESLLKASDVKTSLSNYVRKSSQIANELLQKVEQLALEATPYTIKLATNNGIIFKNNQGQSTVYPTLKKGNKTVECTWQWLVDNQSFETSATFEVRAAGMSNKLVLTAIALIDGKEVAREQVTFSNVNDGAKGDPGKSITITKTERQADGVKVTFSDNKSIVVPKGDKGDPADPKELNQLKQEMNQAKQGLDDVKADLLREKSESSSKIDQVKQDVGAIRNQQTTYEQTNTQNLARITGQLGDKASKSEVKQTADGIREEISRLNTASRNYILNSDMTTATDRTTGTGLPLSSDLIRTLNAERSFTLSVDVVAQNMVAKNDKKRFGISYELKFSDGSNLWTEVFQTSDTALTRISQNFVLPAGKQIVSIAGGLYFQATGQIRLSRPKWGIGHNNKEWIKAVEDTDEQITAARTIFEKTAEGLKTDMAAVKSYVADDGKRREQLEQYTRTETARSAEALRKQASESYVAKSQYSEDARGVARRFEELNLNGTNLLPNTDFKNLIDVGNQFTVGGKTYKVKTLDKWYSSYNDGIPNPKTNYHGYFNETKFSETVFEFNESNGVREWKGLPIFITNDSRYTVGKYIFSVDVNATGEGTHLEVGFYYYNKSGMREFHAGRARKNITSINSWSRISLELSINDDVDFSKEMGFYIYGYGFTSNSVLYFKRPKLTNTNWTPSVEDNNKYTETKIAEYKQTVDGQLAAVKQDVNGKVSQTTFDQRANQITQTVQELNDNVVKKNQIRVNENGIVSTAEKVVNGQTLASMIAQHPEWVEIIAKLLKVKADMIVNGAITADKLNVKKLSALASSLGEISAGLIDLRKHWERTSSEDVWGINRDVTYDTGALLGDFGLLTNGAPTRLQKNDAKPTIMPLVWLNSGELYFANVDSRYDLKQIIVNGVYPFVRTGDAKIRFGKMEDGRDALYIECLLSELYLKANNYTDWKQSEINNKVRWKVQGSLVLVDFNLQFDRDGDYHLADIPKQYVPSNKMFPVQAWSLDRNKDRTAQLNVGGDLHIIGAERGIPYLGQIIWTY
Physico‐chemical
properties
protein length:1368 AA
molecular weight: 153556,83060 Da
isoelectric point:8,47858
aromaticity:0,09211
hydropathy:-0,54898

Domains

Domains [InterPro]
DC_0266
STR
2–824
DC_0266 DC_1024
Coil
Unmapped
517–555
Coil DC_2057
QBX25855.1
1 1368
Architecture
STR
STR 2-1349 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan278
[NCBI] 		2548091 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus intermedius F0413
[NCBI] 		883167 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus intermedius

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX25855.1 [NCBI]
Genbank nucleotide accession
MK448896.1 [NCBI]
CDS location
range 25677 -> 29783
strand +
CDS
GTGAAACGAAACGTAAGAATTGCCATTAGAGACACGACCGACACGCACGTTGTCGGTTTTTTTGATAATAAAAGTGGCATTAAGTACAATGCTGCTAACTTAACACAGTTTTTAAAAGGTTCTTGCAGCGTTCTTGTCCTGACCTACCATTCTAAGAAAATGGTCGCTCAAAGTGGGCAAAAGCTAGCCTTCCGATTTAAAGACAAGGATTTTTGGTTGAATATTAACAGCGTCAAAAAGACAGGTTATAACATTGAGTTGACAGCTTATTCACTGAGCTTGGAAGCGAACAAGGAAAAGCGAGGTCCGCATAAACCTGCGAGTGCCATGACGATTAAGCAGTATATTGAGTATTACGATCCAGAGAACTCGTTTGTAATTGGAATTAACGAAGTGGCAGATAAATCCCTTAAATTGGAATGGAGTGGTACAGATACCATTTTGGCTCGGCTCTATTCAGTTGCCAATGGCTTCGGAGCTGAGTTGGAATTTGTCACAGAGCTAAATAATGACTACTCTCTCAAACGGCATATCATCAATATCTACCGAGAAGGTAATCTTGGTAAAGATAAGACAGGCTTGCCAGTCCGGGTAGGGGAAAAGCTAAAGGTTATCAATTATTCTGATAACATGGATGATTTTTACACTGGCATTCGTAGAACTGGCAAAGACGGTCTGACGATAGCTGGATTAAATAAAAAAATCTATGACGACAAGGGGAATTTACTCTTTTATAGCAGTGGTGATACGCTCTATGCACCGCAGGCAAGAGATAAATACCCATCTATCGCTCGAAAGACCAATGACGGGTATATCGTCAATGAGGATAGCGGTACTGAATATGCTAATAAAGAAGCTCTGTTTGGTTATATGCTGTCTGAGTTGAAGAAGCATTGTGAGTTAAAAGTGGACTATGAAGTAGAGGGAGCAGTGGACGGTAATATTGGTGATAAAAAGACACTGATTGATGCACAACACTTTGACCCTCCACTTTATGTACAAGCTCGGATTAGTGAGCAAACAGAATCTTTGTTGAAGGCAAGCGATGTCAAAACCAGTCTCTCAAACTATGTTCGTAAGTCGAGCCAGATTGCCAATGAATTGTTGCAAAAAGTGGAACAACTAGCACTTGAAGCAACGCCTTATACAATTAAGCTGGCAACAAATAATGGGATTATCTTTAAAAATAACCAAGGGCAATCTACAGTCTATCCAACCCTTAAAAAGGGCAATAAGACAGTTGAGTGTACATGGCAGTGGCTGGTTGATAATCAATCATTTGAAACATCTGCAACATTTGAAGTTAGAGCGGCTGGCATGTCAAATAAGTTAGTGCTGACTGCTATTGCTTTAATCGATGGCAAAGAAGTTGCCAGGGAGCAAGTTACTTTTAGCAATGTCAATGACGGAGCAAAAGGCGACCCCGGAAAATCTATCACAATTACAAAAACAGAACGACAAGCCGATGGAGTGAAAGTTACATTTAGTGATAACAAGTCTATTGTCGTTCCGAAAGGTGATAAAGGAGATCCTGCAGATCCAAAAGAATTAAATCAGCTTAAACAAGAAATGAATCAAGCTAAACAAGGTTTAGATGATGTGAAAGCAGATTTACTCAGGGAGAAATCAGAAAGCTCCTCTAAAATTGATCAAGTCAAACAAGACGTGGGAGCTATCCGGAATCAGCAGACGACCTACGAGCAGACCAACACGCAGAATCTAGCGCGAATAACCGGCCAATTAGGTGACAAAGCCAGCAAATCCGAAGTCAAACAGACTGCAGACGGAATTCGTGAAGAGATTAGTCGCTTGAATACTGCAAGCAGAAACTATATTTTAAATAGTGATATGACTACAGCCACAGATAGAACGACTGGTACAGGTTTGCCTCTGTCATCTGACCTTATCCGCACGCTAAATGCAGAACGTAGTTTTACGTTATCAGTAGATGTGGTTGCTCAAAATATGGTAGCAAAAAATGACAAAAAGCGCTTTGGTATTAGTTACGAGCTTAAGTTTTCTGACGGTAGCAATTTATGGACTGAGGTATTTCAGACAAGCGACACTGCTTTGACACGGATCAGCCAAAACTTTGTTTTGCCAGCTGGCAAGCAAATAGTATCAATTGCTGGTGGGCTATATTTCCAAGCCACTGGTCAAATAAGACTATCAAGACCAAAATGGGGAATCGGCCATAACAACAAAGAGTGGATTAAAGCTGTCGAAGATACAGACGAGCAAATTACTGCAGCCCGTACAATATTCGAAAAAACCGCGGAAGGTCTCAAAACAGATATGGCCGCCGTCAAATCTTATGTAGCAGATGACGGCAAACGCAGAGAACAGTTAGAACAGTACACACGCACAGAAACAGCACGCAGCGCGGAGGCGTTGCGGAAACAAGCCTCTGAAAGCTATGTCGCTAAAAGCCAATATTCGGAAGACGCAAGAGGTGTTGCAAGACGTTTTGAAGAACTAAATCTTAACGGCACTAACTTGCTTCCTAACACTGATTTTAAAAATTTAATTGACGTTGGGAATCAATTTACTGTTGGCGGTAAAACGTATAAAGTAAAGACACTTGACAAATGGTATAGCTCATATAATGATGGTATCCCCAACCCTAAAACAAATTACCACGGTTATTTCAATGAAACAAAATTTAGTGAGACTGTATTTGAGTTCAACGAATCGAACGGTGTTAGAGAGTGGAAAGGACTGCCAATTTTTATCACAAACGATAGTCGTTATACCGTCGGAAAATATATCTTTTCAGTGGATGTTAATGCAACAGGCGAAGGAACACATCTTGAAGTTGGCTTTTATTATTACAACAAATCAGGAATGCGAGAGTTCCACGCCGGAAGAGCGAGAAAAAACATCACGAGCATAAACTCATGGTCTCGTATATCATTAGAACTAAGCATAAATGATGACGTTGATTTTTCGAAGGAGATGGGCTTTTACATTTACGGTTATGGCTTTACATCAAACAGCGTGCTTTACTTTAAGCGGCCAAAATTAACAAATACAAATTGGACACCATCTGTTGAAGACAATAATAAATATACTGAAACTAAGATAGCTGAATACAAGCAGACCGTAGATGGACAACTTGCAGCAGTTAAGCAAGACGTTAATGGCAAAGTCTCACAAACCACATTTGACCAGCGCGCAAATCAAATCACGCAAACTGTACAAGAATTGAATGATAACGTTGTAAAGAAGAATCAAATCAGAGTCAACGAGAACGGGATTGTTTCAACTGCTGAAAAAGTTGTGAACGGCCAGACTTTGGCTAGTATGATTGCGCAACATCCAGAATGGGTGGAAATTATCGCTAAATTGCTTAAAGTTAAAGCAGATATGATTGTAAATGGTGCGATTACAGCAGACAAACTTAACGTTAAAAAGCTGAGCGCACTTGCCTCGAGTTTGGGAGAAATTAGCGCCGGTCTGATTGATTTGCGTAAACATTGGGAACGAACAAGCAGCGAGGATGTTTGGGGAATTAATAGAGATGTTACGTACGATACCGGCGCGTTGCTGGGCGACTTCGGTTTACTTACAAATGGCGCCCCTACGCGACTTCAGAAAAACGATGCTAAACCAACAATTATGCCGCTTGTGTGGTTAAATTCTGGCGAGCTCTACTTCGCGAATGTCGATTCTAGATACGATCTAAAGCAAATAATTGTAAACGGCGTTTATCCATTTGTCAGAACCGGGGACGCAAAAATTCGCTTTGGAAAAATGGAAGACGGGCGAGATGCTCTGTATATAGAGTGTCTGCTTTCAGAGCTTTATCTAAAAGCTAACAATTACACAGACTGGAAACAATCCGAAATCAACAACAAAGTGCGTTGGAAAGTACAAGGCAGTCTTGTGCTTGTCGATTTTAACTTACAATTTGACCGTGATGGTGATTATCATTTGGCAGATATCCCAAAGCAGTACGTGCCTAGCAATAAAATGTTCCCTGTCCAAGCTTGGAGTCTGGACAGGAACAAAGATCGAACAGCTCAATTAAACGTTGGCGGAGATTTACACATTATAGGTGCAGAAAGAGGTATTCCATATCTCGGCCAAATCATTTGGACTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f2c537f3f11c5086e8006ff8e2f815fcff61156498d03cfcee6694d470917d6c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7954
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank