Protein

View in Explore
Genbank accession
YP_009785899.1 [GenBank]
Protein name
Dpo42 (tail protein)
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence DepoCatalog
Probability 1,00
Protein sequence
MDQDIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVTDENRRLLSNITEYRYVSKTRVKLLVETDGFDRVEIRRLTSASERVVDFSDGSVLRAADLNVSQIQSAHIAEEARDAALMAMPQDDAGNLDARNRRIVRLAPGVEGTDAINKNQLDTTLGDAGGILSDMKDLEGEIHDYIEKFADDTALVRGVAWVYNLGSADGGETVITINKSTRTYAVPYIEVNGSRQEVGYHYSFDLETQQITLATPLKAGDFVMVMTTESQLPVETLLASSVGASSIGTATGETVEERLTRLYGHFVHPETYGAVGDGITDDRVALQRSLDVAYENALNGTGPSTVRWSGDYMVSLNPNSLGVSGELAAGRSALCIRPGVSIEGKGTVRLDPSFTGSQSGAVITNWAGPVDDCSIKDIRIYGGKDVATGTGITGILILDSQRVVISDVKVLNSTAGGIYLRKGATEGLYGCSFSKVSGCTVDNAGYIGIQMERPYDNTVIGNTINRCEDNGIDVFGNVNDATVTGIAQSTLITGNNIRDVLNGVFIESCGNTNITGNYIADFRSSGVIYNRINSAANDNSLTSNVLIGASGASAGVSFKNSVGYCTVASNRIQNSDYGIRCVGGGITGLNILPNTMKNIAKTLLFVEARNNGLVKSRMSTQFYEGAQVGGIPSNTSPRGVPHRFPSRLSYIVDIQPFWATEQGTREDNFERAKGTLASITGWGSKCALYDTIVAGDTVVSLNSSSVAVGEYLEINAEVYKVTSVSATYAVVRKWTGSDYTAGDYAAVIISNPSYIIRRVQWGEQ
Physico‐chemical
properties
protein length:793 AA
molecular weight: 85165,21110 Da
isoelectric point:4,96599
aromaticity:0,07440
hydropathy:-0,13493

Domains

Domains [InterPro]
DC_0778
STR
1–461
DC_0778 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_0517
IPR005604
ATT
3–127
IPR005604 IPR011050
IPR012334
STR
299–651
IPR012334
IPR039448
ENZ
366–514
IPR039448
IPR006626
Unmapped
399–428
IPR006626 IPR006626 IPR022441
DC_1312
RBD
449–665
DC_1312
IPR006626
Unmapped
460–482
IPR006626
YP_009785899.1
1 793
Architecture
ATT
STR
RBD
ATT 1-127 | STR 128-651 | RBD 652-793
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009785899.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 310 310 0,9938
Central domain 311 698 389 0,9832
C-terminal 699 793 94 0,9443
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-310
Central
311-698
C-terminal
699-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_IME205
[NCBI] 		1770232 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Przondovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009785899.1 [NCBI]
Genbank nucleotide accession
NC_047761 [NCBI]
CDS location
range 33550 -> 35931
strand +
CDS
ATGGACCAAGACATTAAAACAGTCATTCAGTACCCGGTAGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGTAAGTTCGTGAGGGTATCTCTCGTAACTGATGAGAATCGTCGCCTGCTGAGTAACATCACTGAGTACCGCTATGTGTCTAAGACCAGAGTGAAACTCCTTGTGGAGACAGATGGGTTCGACCGTGTGGAAATCCGCAGGTTAACCTCAGCTTCAGAGCGTGTAGTTGACTTCAGTGATGGCTCAGTTCTCCGTGCGGCAGACCTTAACGTTTCTCAGATTCAGTCCGCACATATCGCAGAGGAAGCACGTGACGCGGCACTCATGGCCATGCCTCAGGATGATGCAGGTAACCTCGATGCCCGTAACCGCAGAATCGTTCGACTGGCTCCGGGTGTTGAAGGTACTGACGCAATCAACAAGAACCAGCTGGACACAACTCTAGGAGATGCTGGTGGTATCCTATCGGACATGAAGGACCTAGAGGGTGAGATTCATGACTACATCGAGAAGTTTGCAGATGACACTGCGCTTGTGCGTGGGGTGGCGTGGGTGTATAACCTTGGTTCCGCTGATGGTGGGGAAACCGTTATCACCATAAATAAATCGACACGTACATACGCTGTGCCTTACATTGAGGTAAATGGCTCACGCCAAGAGGTCGGGTATCACTATTCGTTCGATCTGGAAACACAGCAGATAACCCTTGCCACCCCATTGAAAGCTGGCGACTTCGTTATGGTAATGACCACAGAGTCTCAGCTCCCGGTAGAGACCTTGCTGGCATCTAGCGTTGGTGCCTCGAGCATCGGGACGGCCACAGGAGAGACAGTTGAGGAGCGACTTACTCGACTTTACGGGCACTTTGTGCACCCTGAGACGTATGGTGCTGTAGGTGATGGCATCACAGACGACCGAGTTGCACTCCAGCGCTCACTAGATGTGGCTTATGAGAATGCGCTGAATGGTACTGGCCCGTCGACTGTACGCTGGTCAGGAGACTACATGGTGTCGCTGAACCCTAACTCACTAGGCGTTTCTGGGGAACTGGCAGCAGGTCGCTCAGCACTATGTATCCGACCCGGTGTGTCAATTGAAGGTAAGGGCACGGTCCGTCTTGACCCATCCTTTACAGGAAGCCAGTCTGGCGCAGTAATAACCAACTGGGCTGGTCCAGTTGACGACTGCTCCATTAAGGATATACGGATTTACGGCGGTAAGGACGTAGCCACTGGTACTGGCATAACCGGAATCCTTATTCTGGATTCACAGAGAGTAGTCATATCTGACGTTAAGGTTCTGAACAGTACAGCTGGTGGTATCTATCTGAGAAAAGGTGCCACAGAGGGGCTGTATGGATGCTCATTCAGCAAGGTCTCAGGGTGTACTGTGGATAACGCTGGGTACATTGGAATCCAGATGGAGAGACCGTACGATAATACCGTCATTGGGAACACAATCAATCGGTGTGAAGATAACGGCATTGACGTGTTCGGTAACGTAAACGATGCTACGGTAACGGGCATTGCGCAATCCACGCTAATCACTGGCAACAACATAAGGGATGTCCTAAACGGAGTGTTCATTGAATCCTGCGGCAACACAAACATTACCGGAAACTACATCGCGGACTTTCGCTCCAGCGGGGTCATCTACAACCGCATCAACTCGGCGGCAAATGATAACTCACTCACCTCAAACGTCCTCATCGGCGCCTCAGGTGCTTCGGCAGGTGTTAGCTTCAAGAACTCAGTAGGATACTGTACAGTGGCGAGCAACAGGATTCAAAATAGTGACTACGGGATTCGATGCGTTGGCGGAGGCATTACCGGGCTTAACATCCTCCCAAATACGATGAAGAACATCGCTAAGACCCTCCTGTTTGTGGAGGCCCGTAACAACGGTCTGGTCAAGTCACGTATGTCTACCCAGTTCTACGAAGGGGCACAGGTCGGCGGGATTCCGAGTAACACCTCTCCAAGAGGAGTACCGCACAGATTCCCATCAAGGCTCTCTTATATTGTGGATATCCAACCGTTCTGGGCAACAGAGCAGGGTACCCGCGAGGATAACTTCGAGAGAGCAAAAGGGACCTTGGCGTCAATCACTGGGTGGGGTTCAAAGTGTGCCCTGTATGACACGATTGTGGCAGGTGATACGGTGGTGTCTCTTAACTCATCGTCAGTAGCTGTGGGCGAATACCTTGAGATTAACGCGGAGGTTTATAAGGTTACTAGCGTATCTGCAACTTACGCCGTTGTTCGAAAATGGACTGGTTCGGATTACACGGCTGGAGACTACGCAGCGGTAATTATTAGTAATCCATCCTACATCATTCGCCGGGTGCAGTGGGGCGAACAGTAA

Genome Context

Genome Context

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
DepoCatalog: Mapping the Diversity of 105 Recombinant Klebsiella Phage Depolymerases Across Sequence, Structure, and Substrate Specificity DepoCatalog: Mapping the Diversity of 105 Recombinant Klebsiella Phage Depolymerases Across Sequence, Structure, and Substrate Specificity — https://doi.org/10.1101/2025.09.09.675204 bioRxiv