Protein

View in Explore
Genbank accession
XSF60899.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MIDYDGLKAIFGEKLPESHIFFATVAAHKFVPNYATLRKEFGMTTAHTNRKVWNKFKEAYEVTAPVVPAIAFTKNLAKTLAVDTGAAINLGVTVTGGTAPYTYAWTKDGSPLSGVTGPNFNKATAAAEDAGTYKVVVTDSKSTSITSNECVTTINPAPEA
Physico‐chemical
properties
protein length:160 AA
molecular weight: 16995,04870 Da
isoelectric point:7,80972
aromaticity:0,10000
hydropathy:-0,07625

Domains

Domains [InterPro]
IPR048804
ATT
2–60
IPR048804 IPR007110
DC_0400
STR
6–160
DC_0400
IPR036179
RBD
71–142
IPR036179
IPR013783
STR
76–153
IPR013783
XSF60899.1
1 160
Architecture
ATT
STR
ATT 2-60 | STR 61-160
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PHZ191
[NCBI] 		3412729 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella pullorum
[NCBI] 		605 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSF60899.1 [NCBI]
Genbank nucleotide accession
PV394073.1 [NCBI]
CDS location
range 5058 -> 5540
strand +
CDS
ATGATTGATTATGATGGTCTAAAGGCCATTTTTGGTGAAAAGCTGCCAGAATCTCATATCTTCTTTGCTACGGTTGCAGCACACAAGTTCGTTCCAAACTACGCTACTCTACGTAAAGAGTTTGGAATGACCACTGCACATACCAACCGCAAGGTTTGGAATAAGTTCAAAGAAGCATACGAAGTTACTGCTCCGGTTGTTCCGGCTATAGCTTTCACGAAGAATCTGGCTAAAACTCTAGCTGTTGATACTGGTGCAGCAATTAATCTGGGCGTAACAGTTACTGGTGGTACTGCACCATATACTTATGCTTGGACTAAAGATGGTTCTCCACTTAGTGGTGTTACTGGCCCTAACTTCAACAAAGCTACAGCTGCTGCAGAAGATGCTGGTACTTACAAAGTTGTTGTAACGGATAGTAAATCTACTTCCATTACTTCTAATGAGTGCGTAACAACTATCAATCCTGCGCCGGAGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
841f7e82c9cebb2a1f33e61c342e3816fdf93ca5ee5497abf48248c4664dfcbc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7512
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of broad-host-range bacteriophages targeting multidrug-resistant Salmonella spp. Wang,M., Ren,Y. and Jiang,L. 2021-06-10 — GenBank